Metabolomics,Unknown,Transcriptomics,Genomics,Proteomics

Dataset Information

0

The in vitro expanded CD8+ T cells and its controls


ABSTRACT: CD8+ NKT cells are naturally occurring but rare T cells that express both T cell and natural killer (NK) cell markers. These cells may play key roles in establishing tolerance to self antigens; however, the mechanism of action and the molecular profiles of these cells are poorly characterized due to their extremely low frequencies. We developed a highly efficient in vitro conversion/expansion protocol for such cells and extensively characterized their functional and molecular phenotypes using a variety of genomic and immunological techniques. We used microarrays to elucidate the molecular mechanisms underlying the suppression function of the converted CD8+ NKT cells. Keywords: Cell type comparison To identify candidate genes that might be related to the suppressive activity, the CD8+ NKT cells with potent suppressive activity were compared to three different control cells: 1) CD4+ T cells (with very weak suppression) cultured under the same condition as a control for culture condition, 2) naïve CD8 T cells as the baseline expression level, and 3) CD8+ T cells activated using conventional activation protocols. The last two cell populations do not possess suppressive activity. This data set allows us to examine a number of different questions

ORGANISM(S): Mus musculus

SUBMITTER: Jin-Xiong She 

PROVIDER: E-GEOD-10813 | biostudies-arrayexpress |

REPOSITORIES: biostudies-arrayexpress

altmetric image

Publications

The IL-10 and IFN-gamma pathways are essential to the potent immunosuppressive activity of cultured CD8+ NKT-like cells.

Zhou Li L   Wang Hongjie H   Zhong Xing X   Jin Yulan Y   Mi Qing-Sheng QS   Sharma Ashok A   McIndoe Richard A RA   Garge Nikhil N   Podolsky Robert R   She Jin-Xiong JX  

Genome biology 20080729 7


<h4>Background</h4>CD8+ NKT-like cells are naturally occurring but rare T cells that express both T cell and natural killer cell markers. These cells may play key roles in establishing tolerance to self-antigens; however, their mechanism of action and molecular profiles are poorly characterized due to their low frequencies. We developed an efficient in vitro protocol to produce CD8+ T cells that express natural killer cell markers (CD8+ NKT-like cells) and extensively characterized their functio  ...[more]

Similar Datasets

2009-09-04 | E-GEOD-11775 | biostudies-arrayexpress
2009-02-01 | GSE10813 | GEO
2010-02-28 | E-MEXP-742 | biostudies-arrayexpress
2012-01-18 | E-GEOD-28130 | biostudies-arrayexpress
2009-07-01 | E-GEOD-14706 | biostudies-arrayexpress
2021-12-31 | GSE189350 | GEO
2020-11-18 | GSE151204 | GEO
2015-12-31 | E-GEOD-53150 | biostudies-arrayexpress
2022-11-03 | E-MTAB-11397 | biostudies-arrayexpress
2011-04-01 | E-MEXP-2955 | biostudies-arrayexpress