Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Assessment of mutation on expression levels

ABSTRACT: One lung tumor and its adjacent normal were profiled for expression levels with the Affymetrix HGU133 plus 2.0 array.

ORGANISM(S): Homo sapiens

PROVIDER: GSE20578 | GEO | 2011/02/21

SECONDARY ACCESSION(S): PRJNA129853

REPOSITORIES: GEO

ACCESS DATA

Json Xml

Similar Datasets

Assessment of mutation on expression levels

Project description:One lung tumor and its adjacent normal were profiled for expression levels with the Affymetrix HGU133 plus 2.0 array. One lung tumor sample and its adjacent normal were assayed on the Affymetrix HG-U133 plus 2.0 array to assess the effects of mutation on expression.

2011-02-21 | E-GEOD-20578 | biostudies-arrayexpress

Homo sapiens

Project description:AML genome hybridization to HGU133 Plus 2.0

| PRJNA104689 | ENA

Homo sapiens

Project description:AML mRNA hybridization to HGU133 Plus 2.0

| PRJNA104515 | ENA

Human endometriosis vs normal endometrium study - transcriptional profiling

Project description:Normal and diseased human tissues were profiled for gene expression using the Affymetrix U133 plus 2.0 array In total 20 samples were processed Keywords: Human tissue transcriptional profiling

2007-04-09 | GSE7305 | GEO

Expression data from Empty control, PMM1 wildtype and R150H mutation clones in Cal-27 cells

Project description:To exmaine the PMM1-relative tumor suppression transcriptome in OSCC cells, we preformed the Affymetrix Human Genome U133 Plus 2.0 Array with empty vector, PMM1-wildtype and R150H mutation in Cal-27 cells

2023-03-14 | GSE147053 | GEO

AML genome hybridization to HGU133 Plus 2.0

Project description:CD34-positive and negative fractions were used for genomic DNA preparation, which was hybridized to HGU133 Plus 2.0 arrays. Keywords: Disease state analysis

2007-03-01 | GSE4602 | GEO

Gene expression profiling of HhAntag-treated pancreatic xenografts

Project description:Four vehicle-treated and four HhAntag-treated pancreatic xenograft tumors were profiled for gene expression changes using Affymetrix U133 Plus 2.0 and Affymetrix Mouse Genome 430 2.0 arrays. Keywords: comparative gene expression, hedgehog, hh

2008-09-12 | GSE11981 | GEO

Human body index - transcriptional profiling

Project description:Normal and diseased human tissues were profiled for gene expression using the Affymetrix U133 plus 2.0 array In total 677 samples were processed , representing over 90 distinct tissue types Some tissue samples were purchased from Stratagene (SG), Ambion (AB), and Becton-Dickinson (BD) Keywords: Human body index of gene expression

2007-04-09 | GSE7307 | GEO

Gene expression analysis in a variety of normal, premalignant and squamous cell carcinomas of the cervix

Project description:We sought to apply the technologies of gene expression profiling to detect genes significant in the aetiology of cervical carcinoma . We investigated 14 normal (NAD), 11 low grade squamous intrapepithelial lesions (LSIL), 21 high grade squamous intraepithelial lesions (HSIL) and 28 squamous cell carcinomas by Affymetrix GeneChip whole transcriptome profiling. Two SCC cell lines were also included in the cohort. Normal and SILS were profiled using the Affymetrix U133A platform, while SCCs and Cell lines were profiled using the Affymetrix U133A plus 2.0 array.

2013-09-17 | GSE27678 | GEO

Rhesus Macaque gene expression data obtained using Rhesus Macaque Array or Human Genome U133 Plus 2.0 Array

Project description:The primary goal of this study was to compare the performances of Rhesus Macaque Genome Array and Human Genome U133 Plus 2.0 Array with respect to the detection of differential expressions when rhesus macaque RNA extracts were labeled and hybridized. The secondary goal of this study was to investigate the effect of mismatch position on signal strength in Affymetrix GeneChips by examining naturally occurring mismatches between rhesus macaque transcripts and human probes from Human Genome U133 Plus 2.0 Array. The primary goal of this study was to compare the performances of Rhesus Macaque Genome Array and Human Genome U133 Plus 2.0 Array with respect to the detection of differential expressions when rhesus macaque RNA extracts were labeled and hybridized. The secondary goal of this study was to investigate the effect of mismatch position on signal strength in Affymetrix GeneChips by examining naturally occurring mismatches between rhesus macaque transcripts and human probes from Human Genome U133 Plus 2.0 Array. Keywords: cross hybridization

2008-06-15 | GSE9531 | GEO

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data