Transcriptomics

Dataset Information

300

RNA-seq of two paired normal and cancer tissues in two stage III colorectal cancer patients


ABSTRACT: The RNA from two paired normal and colorectal tumor tissue were sequenced by Illumina genome analyzer. 0.8 to 1.1 million reads were generated. Sequencing data was aligned with human RNA, human mitochondrial DNA and human genomic DNA by BWA. Base calling and Phred-like score was calculated by SAMTools. Whole transcriptome sequence of paired normal and tumor tissues obtained from two colorectal cancer patients

ORGANISM(S): Homo sapiens  

SUBMITTER: Chung-Ming Chang   Po-Li Wei  Ji-Dung Luo  Chiuan-Chian Chiou  Yu-Jia Chang  Yeong-Shin Lin 

PROVIDER: E-GEOD-29580 | ArrayExpress | 2011-05-28

SECONDARY ACCESSION(S): SRP006900GSE29580PRJNA141411

REPOSITORIES: GEO, ArrayExpress, ENA

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