Transcriptomics

Dataset Information

4

H2B-ubiq (NRO3).2-4 hr OR embryo


ABSTRACT: modENCODE_submission_2993 This submission comes from a modENCODE project of Gary Karpen. For full list of modENCODE projects, see http://www.genome.gov/26524648 Project Goal: We aim to determine the locations of the major histone modifications across the Drosophila melanogaster genome. The modifications under study are involved in basic chromosomal functions such as DNA replication, gene expression, gene silencing, and inheritance. We will perform Chromatin ImmunoPrecipitation (ChIP) using genomic tiling arrays. We will initially assay localizations using chromatin from three cell lines and two embryonic stages, and will then extend the analysis of a subset of proteins to four additional animal tissues/stages. For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODEDataReleasePolicyFinal2008.pdf EXPERIMENT TYPE: CHIP-chip. BIOLOGICAL SOURCE: Strain: Oregon-R(official name : Oregon-R-modENCODE genotype : wild type ); Developmental Stage: Embryo 2-4hr OR; Genotype: wild type; NUMBER OF REPLICATES: 4; EXPERIMENTAL FACTORS: Strain Oregon-R(official name : Oregon-R-modENCODE genotype : wild type ); Antibody H2B-ubiq (NRO3) (target is H2Bubi); Developmental Stage Embryo 2-4hr OR

ORGANISM(S): Drosophila melanogaster  

SUBMITTER: Nicole Riddle   Gary Karpen  DCC modENCODE  Vincenzo Pirrotta  Andrey Gortchakov  Art Alekseyenko  Michael Tolstorukov  Greg Shanower  Sarah Elgin  Aki Minoda  Mitzi Kuroda  Cameron Kennedy  Peter Park  Yuri Schwartz  Peter Kharchenko 

PROVIDER: E-GEOD-32732 | ArrayExpress | 2011-10-12

SECONDARY ACCESSION(S): GSE32732

REPOSITORIES: GEO, ArrayExpress

Dataset's files

Source:
Action DRS
E-GEOD-32732.README.txt Txt
E-GEOD-32732.eSet.r Other
E-GEOD-32732.idf.txt Idf
E-GEOD-32732.raw.1.zip Raw
E-GEOD-32732.sdrf.txt Txt
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