Genomics

Dataset Information

303

Methylation Changes During Soybean Seed Development


ABSTRACT: What methylation changes are occurring during seed development largely remains unknown. To uncover the possible role of DNA methylation during the transition from seed differentiation to maturation and dormany in soybean, we characterized the methylome of whole seeds representing the differentiation (GLOB stage), maturation (early- (EM), mid- (B1) and late- (AA1) maturation stages), and dormancy (DRY stage) phases of soybean seed development using Illumina sequencing. In addition, we characterized the methylome of the mid-maturation stage embryonic axis (B1-AX) to examine methylation differences, if any, between an embryonic region compared to the whole seed. Illumina sequencing of bisulfite-converted genomic DNA from globular stage (GLOB), early-maturation stage (EM), mid-maturation stage (B1), and late-maturation stage (AA1) seeds, dormancy stage (DRY) and mid-maturation embryonic axis (B1-AX).

ORGANISM(S): Glycine max  

SUBMITTER: Robert B Goldberg   Brandon Le  Brandon H Le  Min Chen  Jer-Young Lin 

PROVIDER: E-GEOD-34637 | ArrayExpress | 2011-12-22

SECONDARY ACCESSION(S): SRP010037GSE34637PRJNA151265

REPOSITORIES: GEO, ArrayExpress, ENA

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