Transcriptomics

Dataset Information

47

Transcriptomics studies in Vriesea carinata


ABSTRACT: This SuperSeries is composed of the SubSeries listed below. Refer to individual Series

ORGANISM(S): Vriesea carinata  

SUBMITTER: Frank F Guzman  Rogério R Margis   Rogerio Margis   Mauricio M Almerao    

PROVIDER: E-GEOD-38250 | ArrayExpress | 2014-06-02

SECONDARY ACCESSION(S): GSE38250PRJNA167522

REPOSITORIES: GEO, ArrayExpress

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Publications

Identification of potential miRNAs and their targets in Vriesea carinata (Poales, Bromeliaceae).

Guzman Frank F   Almerão Mauricio Pereira MP   Korbes Ana Paula AP   Christoff Ana Paula AP   Zanella Camila Martini CM   Bered Fernanda F   Margis Rogério R  

Plant science : an international journal of experimental plant biology 20130602


The miRNAs play important roles in regulation of gene expression at the post-transcriptional level. A small RNA and RNA-seq of libraries were constructed to identify miRNAs in Vriesea carinata, a native bromeliad species from Brazilian Atlantic Rainforest. Illumina technology was used to perform high throughput sequencing and data was analyzed using bioinformatics tools. We obtained 2,191,509 mature miRNAs sequences representing 54 conserved families in plant species. Further analysis allowed th  ...[more]

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