Transcriptomics

Dataset Information

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Off-target effects of VEGF-A regulation by shRNAs


ABSTRACT: The aim of this project was to investigate how genome-wide gene expression patterns change when the expression of VEGF-A is modulated using different lentivirally delivered shRNA molecules that are complementary to VEGF-A promoter region. To study these changes, 12 gene expression array experiments were conducted with mouse endothelial cell line (C166). The C166 cells were transduced (20% confluency, MOI 10) with lentiviral vectors that all express GFP marker gene and two of them express additional shRNA molecule that is complementary to different regions in the VEGF-A promoter and either up-regulate (VEGF-up) or downregulate (VEGF-down) VEGF-A expression. Fresh medium was changed 72h after transduction. Cells were collected at day 7.

ORGANISM(S): Mus musculus  

SUBMITTER: Mikko Petri Turunen   Tiia Husso  Mikko P Turunen 

PROVIDER: E-GEOD-47444 | ArrayExpress | 2015-08-06

SECONDARY ACCESSION(S): GSE47444PRJNA205620

REPOSITORIES: GEO, ArrayExpress

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