Transcriptomics

Dataset Information

61

Gene expression profile of human cardiac fibroblasts (HCFs), induced cardiomyocytes (iCMs), and heart


ABSTRACT: Global gene expression profile of total 24460 probes in the iCMs. The gene expression shifts from a fibroblast state toward a cardiac-like phenotype by Gata4/Mef2c/Tbx5/Mesp1/Myocd (GMTMM) or GMTMM/miR-133 transduction at 7 days after transduction. MiR-133 silenced fibroblast signatures in parallel with cardiac gene activation, and Snai1 overexpression inhibited the effects of miR-133-mediated cardiac reprogramming. HCFs were used for negative control, human heart tissue for positive control. Gene expression profiles were compared among HCFs, iCMs and heart. 24460 probes were analyzed in each experiment.

ORGANISM(S): Homo sapiens  

SUBMITTER: Masaki Ieda   Satoshi Kondo  Naoto Muraoka 

PROVIDER: E-GEOD-56874 | ArrayExpress | 2014-07-03

SECONDARY ACCESSION(S): GSE56874PRJNA244923

REPOSITORIES: GEO, ArrayExpress

altmetric image

Publications


Fibroblasts can be directly reprogrammed into cardiomyocyte-like cells (iCMs) by overexpression of cardiac transcription factors or microRNAs. However, induction of functional cardiomyocytes is inefficient, and molecular mechanisms of direct reprogramming remain undefined. Here, we demonstrate that addition of miR-133a (miR-133) to Gata4, Mef2c, and Tbx5 (GMT) or GMT plus Mesp1 and Myocd improved cardiac reprogramming from mouse or human fibroblasts by directly repressing Snai1, a master regulat  ...[more]

Similar Datasets

2014-07-03 | E-GEOD-56875 | ArrayExpress
2014-07-03 | E-GEOD-56913 | ArrayExpress
2016-08-01 | E-GEOD-71432 | ArrayExpress
2014-10-01 | E-GEOD-51210 | ArrayExpress
2015-05-22 | E-GEOD-57676 | ArrayExpress
2014-01-08 | E-GEOD-51211 | ArrayExpress
2015-11-24 | E-GEOD-63454 | ArrayExpress
2015-07-23 | E-GEOD-65532 | ArrayExpress
2015-08-01 | E-GEOD-59568 | ArrayExpress
2016-09-01 | E-GEOD-72235 | ArrayExpress