Transcriptomics

Dataset Information

50

Tet1 and Tet2 mediate epigenetic regulation of developmental genes by protecting DNA methylation canyons against hypermethylation [RNA-Seq]


ABSTRACT: This study uses whole-transcriptome sequencing to characterize the transcriptomes of mouse embryonic fibroblasts (MEF's). Two conditions were analyzed, MEF cells with intact TET1/TET2 enzymes (WT) and MEF cells with TET1/TET2 knocked out (DKO). Our results identify sets of differentially expressed genes which are correlated with TET1/TET2 induced methylation changes of the corresponding genes. Whole transcriptome analysis of M. musculus MEF cells. Two conditions were sequenced and analyzed, the first is wild type (WT), the second corresponds to knock-out of TET1 and TET2 enzymes.

ORGANISM(S): Mus musculus  

SUBMITTER: F Lyko  R Jaenisch   Guenter Raddatz    

PROVIDER: E-GEOD-58609 | ArrayExpress | 2015-12-12

SECONDARY ACCESSION(S): SRP043369GSE58609PRJNA253014

REPOSITORIES: GEO, ArrayExpress, ENA

altmetric image

Publications

Sorry, this publication's infomation has not been loaded in the Indexer, please go directly to PUBMED or Altmetric.

Similar Datasets

2015-12-12 | E-GEOD-58610 | ArrayExpress
2014-05-03 | E-GEOD-42396 | ArrayExpress
2014-06-01 | E-GEOD-55049 | ArrayExpress
2014-05-03 | E-GEOD-39997 | ArrayExpress
2014-05-03 | E-GEOD-39996 | ArrayExpress
2014-05-03 | E-GEOD-38651 | ArrayExpress
2014-05-03 | E-GEOD-42170 | ArrayExpress
2014-05-03 | E-GEOD-41214 | ArrayExpress
2014-05-31 | E-GEOD-50198 | ArrayExpress
2014-12-06 | E-GEOD-63771 | ArrayExpress