Transcriptomics

Dataset Information

4

Retinoids induce rapid dynamic changes in the non-coding RNAs and epigenetic profiles of murine Hox clusters (ChIP-chip)


ABSTRACT: Physiologically relevant concentrations of retinoic acid are added to Mouse ES cells and a time course (0-72 hours) is examined with tiling array ChIP-chip and RNA-seq to characterize the early dynamics of expression of coding and non-coding RNAs and epigenetics in and around the Hox clusters. Expression, epigenetics, and RARs are examined at various timepoints (0-24hrs) after retinoic acid induced neuronal differentiation

ORGANISM(S): Mus musculus  

SUBMITTER: Christopher Seidel   Ali Shilatifard  Brian Fleharty  Robb Krumlauf  Jay Unruh  Karin Zueckert-Gaudenz  Edwin Smith  William McDowell  Madelaine Gogol  Ariel Paulson  Bony De Kumar  Hua Li  Mark E Parrish  Chengqi Lin  Brian Slaughter  Youngwook Ahn 

PROVIDER: E-GEOD-61584 | ArrayExpress | 2015-04-27

SECONDARY ACCESSION(S): GSE61584PRJNA261539

REPOSITORIES: GEO, ArrayExpress

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