Transcriptomics

Dataset Information

297

Gene expression changes in Tulasnella calospora- Serapias vomeracea mycorrhizal protocorms compared to Tulasnella calospora free-living mycelium


ABSTRACT: Illumina HiSeq technology was used to generate mRNA profiles from Tulasnella calospora mycorrhizal protocorms compared to free-living mycelium . Protocorms and control mycelium were harvested after 30 days and used for RNA extraction. Reads of 2X100bp were generated and aligned to Tulasnella calospora transcripts (http://genome.jgi-psf.org/Tulca1) using CLC Genomics Workbench 6. mRNA profiles from Tulasnella calospora mycorrhizal protocorms and free-living mycelium were generated by paired-end (2x100bp) Illumina HiSeq2000 sequencing. Three biological replicates were sequenced for mycorrhizal and mycelium samples.

ORGANISM(S): Tulasnella calospora  

SUBMITTER: Annegret Kohler   Mariangela Girlanda  Francis Martin  Silvia Perotto 

PROVIDER: E-GEOD-63869 | ArrayExpress | 2015-02-06

SECONDARY ACCESSION(S): SRP050561GSE63869PRJNA269291

REPOSITORIES: GEO, ArrayExpress, ENA

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