Transcriptomics

Dataset Information

7

Comparison of the Transcriptional Profiles of Melanocytes from Dark and Light Skinned Individuals under Basal Conditions and Following Ultraviolet-B Irradiation


ABSTRACT: We analysed the whole-genome transcriptional profile of 6 cell lines of dark melanocytes (DM) and 6 of light melanocytes (LM) at basal conditions and after UVB at different time points (6, 12 and 24h) to investigate the mechanisms by which melanocytes protect human skin from the damaging effects of ultraviolet-B radiation (UVB). Further, we assessed the effect of different keratinocyte-conditioned media (KCM+ and KCM-) on melanocytes. We analysed six lines of melanocytes isolated from lightly pigmented neonatal foreskin (LM), and six lines from darkly pigmented neonatal foreskin (DM), at 0, 6, 12 and 24 hours post UV irradiation. We also assessed the effect of different keratinocyte-conditioned media (KCM+ or KCM-)

ORGANISM(S): Homo sapiens  

SUBMITTER: Isabel Smith-Zubiaga   Saioa Lopez  Santos Alonso 

PROVIDER: E-GEOD-70280 | ArrayExpress | 2015-08-08

SECONDARY ACCESSION(S): GSE70280PRJNA288298

REPOSITORIES: GEO, ArrayExpress

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Publications

Comparison of the Transcriptional Profiles of Melanocytes from Dark and Light Skinned Individuals under Basal Conditions and Following Ultraviolet-B Irradiation.

López Saioa S   Smith-Zubiaga Isabel I   García de Galdeano Alicia A   Boyano María Dolores MD   García Oscar O   Gardeazábal Jesús J   Martinez-Cadenas Conrado C   Izagirre Neskuts N   de la Rúa Concepción C   Alonso Santos S  

PloS one 20150805 8


We analysed the whole-genome transcriptional profile of 6 cell lines of dark melanocytes (DM) and 6 of light melanocytes (LM) at basal conditions and after ultraviolet-B (UVB) radiation at different time points to investigate the mechanisms by which melanocytes protect human skin from the damaging effects of UVB. Further, we assessed the effect of different keratinocyte-conditioned media (KCM+ and KCM-) on melanocytes. Our results suggest that an interaction between ribosomal proteins and the P5  ...[more]

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