Transcriptomics

Dataset Information

298

Transcriptome-wide high-throughput deep m6A-seq reveals unique m6A methylation differential patterns among three organs in Arabidopsis


ABSTRACT: m6A is a ubiquitous RNA modification in eukaryotes. Transcriptome-wide m6A patterns in Arabidopsis have been assayed recently. However, m6A differential patterns among organs have not been well characterized. The goal of the study is to comprehensively analyze m6A patterns of numerous types of RNAs, the relationship between transcript level and m6A methylation extent, and m6A differential patterns among organs in Arabidopsis. In total, 18 libraries were sequneced. For the 3 organs: leaf, flower and root, each organ has mRNA-Seq, m6A-Seq and Input sequenced. And each sequence has 2 replicats.

ORGANISM(S): Arabidopsis thaliana  

SUBMITTER: Shaojun Xie   Yizhen Wan  Kai Tang 

PROVIDER: E-GEOD-72706 | ArrayExpress | 2015-10-28

SECONDARY ACCESSION(S): SRP063314GSE72706PRJNA294703

REPOSITORIES: GEO, ArrayExpress, ENA

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