Genomics

Dataset Information

8

IRF4 ChIP-on-chip for Myeloma Cell Lines


ABSTRACT: To identify IRF4 transcription factor binding on chromatin at 5' regulatory regions of genes in myeloma cell line models. Keywords: binding site identification design Formaldehyde cross-linked, sonicated chromatin is prepared from cell lines Kms12 (test) and Ly19 (control). Chromatin immunoprecipated with anti-IRF4 antibody is labeled with Cy5 and co-hybridized on Agilent Human Promoter Set arrays with chromatin immunoprecipated with normal sera labeled with Cy3 . Two biological replicates were performed for the Kms12 and Ly19 experiments.

ORGANISM(S): Homo sapiens  

SUBMITTER: Louis M. Staudt  

PROVIDER: E-GEOD-9367 | ArrayExpress | 2010-05-25

SECONDARY ACCESSION(S): GSE9367PRJNA103071

REPOSITORIES: GEO, ArrayExpress

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Publications


The transcription factor IRF4 (interferon regulatory factor 4) is required during an immune response for lymphocyte activation and the generation of immunoglobulin-secreting plasma cells. Multiple myeloma, a malignancy of plasma cells, has a complex molecular aetiology with several subgroups defined by gene expression profiling and recurrent chromosomal translocations. Moreover, the malignant clone can sustain multiple oncogenic lesions, accumulating genetic damage as the disease progresses. Cur  ...[more]

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