Transcriptomics

Dataset Information

3

Transcription profiling of chicken jejuna in a time series after orally infection with Salmonella


ABSTRACT: RNA was extracted form chicken jejuna at 0.33,1, 2, 4, 8, 12 and 21 days post-infection, in orally infected (1.10^5 Salmonella ) and control chickens.
NOTE: Normalization is performed separately! on control and infected chickens, because the objective was to investigate differences in development.

ORGANISM(S): Gallus gallus  

DISEASE(S): Control,Salmonella-infected

SUBMITTER: Dirkjan Schokker  

PROVIDER: E-MEXP-2042 | ArrayExpress | 2010-03-01

REPOSITORIES: ArrayExpress

Dataset's files

Source:
Action DRS
E-MEXP-2042.README.txt Txt
E-MEXP-2042.idf.txt Idf
E-MEXP-2042.idf.txt_original Idf
E-MEXP-2042.processed.1.zip Processed
E-MEXP-2042.raw.1.zip Raw
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Publications

Jejunal gene expression patterns correlate with severity of systemic infection in chicken.

Schokker Dirkjan D   Smits Mari A MA   Rebel Johanna Mj JM  

BMC proceedings 20110603


<h4>Background</h4>Not much is known about the effect of Salmonella enteritidis on changes in the developmental processes occurring in the intestine of young chicken. Therefore we investigated the correlation of intestinal gene expression patterns with the severity of systemic Salmonella infections.<h4>Methods</h4>The number of Salmonella colony forming units (CFUs) in the liver of infected chicken were plotted against the average intestinal expression profiles of previously identified gene expr  ...[more]

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