Transcriptomics

Dataset Information

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RNA-seq of E. coli strains overproducing DNA "damage-up" proteins (DDPs)


ABSTRACT: This experiment assesses gene expression changes in response to the overproduction of DNA \"damage-up\" proteins (DDPs). These proteins, when overproduced, activate the SOS DNA damage response and were identified in a genome-wide overproduction screen using the mobile plasmid collection (Saka et al 2005). For the RNA-seq experiments, 7 DDP overproduction strains were compared to an empty vector control strain.

INSTRUMENT(S): Illumina MiSeq

ORGANISM(S): Escherichia coli K-12  

SUBMITTER: Devon M Fitzgerald   

PROVIDER: E-MTAB-7361 | ArrayExpress | 2019-01-10

SECONDARY ACCESSION(S): ERP111806

REPOSITORIES: ArrayExpress, ENA

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