Transcriptomics

Dataset Information

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Single-cell RNA-seq of mouse cardiac interstitial cells 3 & 7 days after sham or myocardial infarction injury


ABSTRACT: The aims of the experiment were to profile the cell types in the adult mouse cardiac interstitium (non-myocute cells) and how they respond to myocardial infarction injury. Adult, male, Pdgfra +/GFP mice were subject to either a myocardial infarction or sham injury, with cells isolated from cardiac ventricles 3 or 7 days following surgery. We obtained scRNA-seq profiles of two cell fractions: total interstitial (non-myocyte) cell population (TIP) and FACS-sorted GFP+/Cd31- cells (GFP).

INSTRUMENT(S): Illumina HiSeq 2500, NextSeq 500

ORGANISM(S): Mus musculus  

SUBMITTER: Ralph Patrick  

PROVIDER: E-MTAB-7376 | ArrayExpress | 2019-03-28

SECONDARY ACCESSION(S): ERP112348

REPOSITORIES: ArrayExpress, ENA

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