Dataset Information


Characterisation of an oesophageal adenocarcinoma cell line (The MFD-1)

ABSTRACT: A cell line (MFD-1) was derived from a 55-year old male with oesophageal adenocarcinoma. Using different sources of genetic material from normal and tumour tissue surgically resected, peripheral blood and the derived cell line a high concordance of genotypes calls across the whole genome confirms MFD-1 was derived from parent tumour. The SNP6 array contained 906,000 probes for the genotyping of SNPs and 946,000 probes for the genotyping of non-polymorphic copy number. Affymetrix CEL files were analysed using the tool PICNIC2 (predicting absolute allele copy number variation with microarray cancer data).

ORGANISM(S): Homo sapiens

PROVIDER: E-MTAB-4590 | BioStudies |

REPOSITORIES: biostudies

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