Genomics

Dataset Information

765

Helicobacter pylori Oki128


ABSTRACT: Helicobacter pylori Oki128 Genome sequencing

ORGANISM(S): Helicobacter pylori oki128  

PROVIDER: PRJNA215150 | ENA |

REPOSITORIES: ENA

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Publications

Complete Genome Sequences of Eight Helicobacter pylori Strains with Different Virulence Factor Genotypes and Methylation Profiles, Isolated from Patients with Diverse Gastrointestinal Diseases on Okinawa Island, Japan, Determined Using PacBio Single-Molecule Real-Time Technology.

Satou Kazuhito K   Shiroma Akino A   Teruya Kuniko K   Shimoji Makiko M   Nakano Kazuma K   Juan Ayaka A   Tamotsu Hinako H   Terabayashi Yasunobu Y   Aoyama Misako M   Teruya Morimi M   Suzuki Rumiko R   Matsuda Miyuki M   Sekine Akihiro A   Kinjo Nagisa N   Kinjo Fukunori F   Yamaoka Yoshio Y   Hirano Takashi T  

Genome announcements 20140417 2


We report the complete genome sequences of eight Helicobacter pylori strains isolated from patients with gastrointestinal diseases in Okinawa, Japan. Whole-genome sequencing and DNA methylation detection were performed using the PacBio platform. De novo assembly determined a single, complete contig for each strain. Furthermore, methylation analysis identified virulence factor genotype-dependent motifs. ...[more]

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