Genomics

Dataset Information

295


ABSTRACT: Comprehensive analysis of OXA-48 producing Escherichia coli from a Spanish hospital using whole genome sequencing combined with conventional typing tools

PROVIDER: PRJNA381431 | ENA |

REPOSITORIES: ENA

altmetric image

Publications

Whole genome sequencing, molecular typing and in vivo virulence of OXA-48-producing Escherichia coli isolates including ST131 H30-Rx, H22 and H41 subclones.

de Toro María M   Fernández Javier J   García Vanesa V   Mora Azucena A   Blanco Jorge J   de la Cruz Fernando F   Rodicio M Rosario MR  

Scientific reports 20170921 1


Carbapenem-resistant Enterobacteriaceae, including the increasingly reported OXA-48 Escherichia coli producers, are an emerging public health threat worldwide. Due to their alarming detection in our healthcare setting and their possible presence in the community, seven OXA-48-producing, extraintestinal pathogenic E. coli were analysed by whole genome sequencing as well as conventional tools, and tested for in vivo virulence. As a result, five E. coli OXA-48-producing subclones were detected (O25  ...[more]

Similar Datasets

| PRJNA420621 | ENA
| PRJNA419295 | ENA
| PRJNA391952 | ENA
2013-12-31 | E-GEOD-47015 | ArrayExpress
2018-07-11 | PXD008019 | Pride
| PRJEB13016 | ENA
2016-12-22 | PXD004236 | Pride
| PRJNA314222 | ENA
| PRJNA71587 | ENA
2010-05-26 | E-GEOD-10405 | ArrayExpress