<HashMap><database>bioimages</database><scores/><additional><omics_type>Unknown</omics_type><submitter>Christian Gabriel</submitter><species>Homo sapiens (human)</species><full_dataset_link>https://www.ebi.ac.uk/biostudies/studies/S-BSST630</full_dataset_link><repository>bioimages</repository><figure_sub>Organization</figure_sub><pubmed_authors>Christian Gabriel</pubmed_authors></additional><is_claimable>false</is_claimable><name>Circadian time series of dexamethasone synchronized U-2 OS knock-in cell expressing fluorescent fusion proteins of CRY1 and/or PER2 </name><description>U-2 OS knock-in cells were genereated using CRISPR to express CRY1 and/or PER2 fused to either mScarlet-I or mClover3 from the endogenous promoter. Cells were synchronized with dexamethasone and imaged for 71h with an sampling interval of 1/h, starting 2 h after synchronization. Files are .nd2 and contain 3 channels: (1)RFP channel, (2)YFP channel, (3) DIC channel. All files are stacks with 71 timepoints. nd2 file image stacks can be opened using the freeware Fiji/ImageJ, but also contain alot of metadata. For each cell line, 10 imaging regions are provided.
The cells identifiers are as follows: 42c5: CRY1-mClover3, 44c5: CRY1-mScarlet-I, 56c1: PER2-mClover3. 58b59: PER2-mScarlet-I. 80c16: CRY1-mClover3/PER2-mScarlet-I.
Additionally, 4 imagiong areas without cells are provided, which were </description><dates><release>2021-04-15T00:00:00Z</release><modification>2023-04-09T17:42:42.349Z</modification><creation>2021-04-15T12:28:14Z</creation></dates><accession>S-BSST630</accession><cross_references/></HashMap>