<HashMap><database>bioimages</database><scores/><additional><omics_type>Unknown</omics_type><submitter>Sandra Dieni</submitter><journal>The Journal of Cell Biology</journal><full_dataset_link>https://www.ebi.ac.uk/biostudies/studies/S-JCBD-201201038</full_dataset_link><attach_to>JCB</attach_to><legend>Electron micrograph of an ultrathin section of a wild-type mouse stratum lucidum pre-labeled with anti-BDNF immunogold particles.</legend><legend>Pro-BDNF antibodies (green) do not produce an immunoreactive signal in the CA3 region of a cbdnf-/- mouse hippocampus.</legend><legend>Anti-pro-BDNF-Mab5H8-IR (green) labeling is markedly increased in the hilus of the dentate gyrus in a Bsn mouse mutant.</legend><legend>Electron micrograph of a cbdnf-/- mouse dendritic  profile in the stratum lucidum labeled with anti-pro-BDNF-immunogold antibodies.</legend><legend>Pro-BDNF antibodies (green) do not produce an immunoreactive signal in the dentate gyrus region of a cbdnf-/- mouse hippocampus.</legend><legend>An electron micrograph of anti-BDNF-immunogold labeling of sections from cbdnf-/- mice yielded non-specific background labeling.</legend><legend>Anti-BDNF-IR (red) labeling is markedly increased in the CA3 area of a Bsn mouse mutant.</legend><legend>Low power confocal z-stack of the dentate gyrus of a wild-type mouse hippocampus. The same subset of granule cells co-expresses  BDNF-IR (red) and pro-BDNF-IR (green).</legend><legend>Electron micrograph showing the Golgi complex of a wild-type mouse CA3 neuron labeled with anti-pro-BDNF immunogold. Clusters of gold grains aggregate around the cisterns of the Golgi apparatus.</legend><legend>Anti-BDNF-IR (red) labeling is markedly increased in the hilus of the dentate gyrus of a Bsn mouse mutant.</legend><legend>High resolution confocal z-slice of the stratum radiatum in the CA1 region of a BDNF-Myc mouse. Overlay of anti-Myc (red) and anti-synaptopodin (green) labeling shows presynaptic localization of BDNF, with close apposition of Myc-IR with synpo-positive spines.</legend><legend>Confocal z-slice of a wild-type mouse stratum lucidum labeled with antibodies to Myc (red) and VGLUT-1 (green).</legend><legend>Myc-IR (red) and  CCK-IR (green) in presynaptic terminals within a wild-type mouse stratum lucidum. The merged image indicates complete segregation of the two peptides in the mossy fiber projection.</legend><legend>A small proportion of mossy fiber boutons in the wild-type mouse stratum lucidum co-expresses Myc-IR (red) and Met-enk-IR (green). However, in the merged image (shown), Myc- and Met-enk-IR puncta do not overlap.</legend><legend>Electron micrograph of mossy fiber boutons from a Bsn mouse mutant section pre-labeled with BDNF immunogold.</legend><legend>In sections processed for anti-BDNF immunogold, gold-labeled vesicles were observed in electron micrographs of wild-type mouse unmyelinated mossy fiber axons.</legend><legend>Electron micrograph of a mossy fiber bouton from a wild-type mouse section pre-labeled with anti-pro-BDNF immunogold.</legend><legend>Electron micrograph of a wild-type mouse dendrite labeled with pro-BDNF-immunogold antibodies.</legend><legend>Electron micrograph of a wild-type mouse dendritic profile in the stratum lucidum labeled with anti-pro-BDNF-immunogold antibodies.</legend><legend>Immunoprecipitation with anti-BDNF antisera and Western blot analysis with anti-BDNF N-20 antibody demonstrating the recovery of wild-type recombinant pro-BDNF (upper bands, lanes 2,5) and mature BDNF (lower bands, lanes 2,5) from mouse hippocampal lysates in the absence (lane 2) or presence (lane 5) of protease inhibitors. Lanes 1, 3 and 4 represent control samples (1 = +wild-type HIP only; 3 = +protease inhibitors, +recombinant BDNF; 4 = +wild-type HIP, +protease inhibitors).</legend><legend>Low power images of a wild-type mouse dentate gyrus labeled with anti-BDNF (red) and anti-pro-BDNF-(green) antibodies.</legend><legend>High magnification view of the dentate gyrus region of a cbdnf-/- mouse hippocampus stained with anti-BDNF antibodies (red). Note the absence of immunoreactive signals in all cellular and neuropil layers.</legend><legend>No BDNF-positive secretory vesicles were found by immunogold labeling in a section from a cbdnf-/- mice visualized in this electron micrograph.</legend><legend>In the stratum lucidum of a Bsn mouse mutant, an increased density of labeled profiles was observed, with  BDNF-IR (green) labeling showing virtually no overlap with labeling for the post-synaptic marker MAP-2 (red).</legend><legend>Low power view of a wild-type mouse hippocampal section stained with anti-BDNF antibodies (red).</legend><legend>A high resolution confocal z-slice shows co-localization of BDNF-IR (red) and pro-BDNF-IR (green) labeling at the border of stratum radiatum and stratum lacunosum-moleculare in a section from a Bsn mutant mouse.</legend><legend>No pro-BDNF-positive secretory vesicles were found by immunogold labeling in this electron micrograph of a section from a cbdnf-/- mice.</legend><legend>Anti-BDNF-positive granule cells in a Bsn mouse mutant shows labeling confined to the cell soma and no detectable dendritic staining in the inner molecular layer.</legend><legend>Electron micrograph of a Bsn mouse mutant dendrite labeled with anti-BDNF immunogold.</legend><legend>Low power image of a wild-type mouse CA3 region labeled with anti-pro-BDNF-Mab5H8 (green) antibodies.</legend><legend>No specific staining is observed in the dentate gyrus region of a wild-type mouse hippocampus section treated with anti-Myc antibodies (red).</legend><legend>Electron micrograph of a cbdnf-/- mouse dendritic  profile in the stratum lucidum labeled with anti-BDNF-immunogold antibodies.</legend><legend>Merged confocal z-slice of a wild-type mouse stratum lucidum labeled with antibodies to  Myc (red) and Synaptophysin (green).</legend><legend>Electron micrograph of a wild-type mouse dendrite labeled with anti-BDNF immunogold.</legend><legend>Anti-pro-BDNF-Mab5H8-positive granule cells (green) in a Bsn mouse mutant shows labeling confined to the cell soma and no detectable dendritic staining in the inner molecular layer.</legend><legend>Electron micrograph of a Bsn mouse mutant dendrite labeled with pro-BDNF immunogold.</legend><legend>Shown is Myc-IR (red) and MAP-2-IR (green) labeling in a confocal z-stack from a wild-type mouse CA3 region highlighting Myc-positive neuronal somata  in the PCL and mossy fiber bouton profiles in the stratum lucidum. No overlap between Myc and MAP2 labeling can be seen.</legend><legend>Electron micrograph of a mossy fiber bouton from a Bsn mouse mutant section pre-labeled with anti- pro-BDNF immunogold.</legend><legend>Low power image of a wild-type mouse CA3 region labeled with anti-BDNF antibodies (red).</legend><legend>Anti-pro-BDNF-Mab5H8-IR (green) labeling is markedly increased in the CA3 area of a Bsn mouse mutant.</legend><legend>A confocal stack of a BDNF-(red) and pro-BDNF (green)-immunoreactive granule cell counterstained with DAPI (blue) from a wild-type mouse hippocampus. Labeling concentrated at the cell apex in distinct clusters, with partial overlap of the BDNF and pro-BDNF signals.</legend><legend>Electron micrograph of a mossy fiber bouton from a wild-type mouse section  pre-labeled with anti-BDNF immunogold.</legend><legend>BDNF-IR (red) and pro-BDNF-IR (green) labeling in a Bsn mouse mutant shows a laminar-specific increase in staining at the border of stratum radiatum and stratum laconosum-moleculare.</legend><legend>Electron micrograph of a wild-type mouse dendritic  profile in the stratum lucidum labeled with anti-BDNF-immunogold antibodies.</legend><legend>In stratum lucidum of a Bsn mouse mutant, an increased density of labeled profiles was observed, with BDNF-IR (red) labeling showing virtually no overlap with labeling for the post-synaptic marker Synaptopodin (green).</legend><legend>High resolution confocal z-stack of a wild-type mouse dentate gyrus labeled with antibodies against BDNF (red), pro-BDNF (green) and Arc/Arg3.1 (blue).</legend><legend>No specific staining in the CA3 region of a wild-type mouse hippocampus section treated with anti-Myc antibodies (red).</legend><legend>Both pro-BDNF and its pro-peptide were detected by Western blotting of mouse hippocampal lysates immunoprecipitated with anti-pro-BDNF antibody and detected with anti-pro-BDNF monoclonal antibody 5H8 in wildtype (lane 1) but not in cbdnf-/- mouse samples (lane 2). Cleavage-resistant pro-BDNF (lane 3), recombinant BDNF pro-peptide (lanes 4 &amp;amp; 5) and recombinant non-glycosylated pro-peptide (lane 6) were used as molecular weight markers.</legend><legend>A Bdnf-Myc-expressing mouse hippocampus section treated with anti-Myc antibodies (red) shows a similar staining pattern to that produced by anti-BDNF antibodies.</legend><legend>Polyclonal pro-BDNF antibodies (green) yield a similar pattern to that of anti-BDNF in a wild-type mouse hippocampus section.</legend><legend>Co-labeling of the Bsn mouse mutant CA1 region with antibodies against BDNF (red) and Synaptopodin (green) reveals a segregation of  signals at the border of stratum radiatum and stratum lacunosum-moleculare.</legend><legend>Co-labeling of a Bsn mouse mutant CA1 region with antibodies against BDNF (red) and GFAP (green) shows a lack of BDNF-IR in astrocytes in a confocal z-stack.</legend><legend>High resolution confocal z-stack of a single CA3 neuron from a wild-type mouse hippocampus labeled with antibodies against Myc (red),  pro-BDNF (green) and GM130 (light blue).</legend><legend>Electron micrograph of an anti-pro-BDNF immunogold-labeled wild-type mouse mossy fiber bouton containing cluster-labeled secretory vesicles.</legend><legend>Electron micrograph showing anti-BDNF-immunogold labeling of a mouse presynaptic terminal in the stratum radiatum of CA1.</legend><legend>Immunoprecipitation with anti-BDNF antisera and Western blot analysis with anti-BDNF N20 antibody of hippocampal lysates from Bsn mouse mutants revealed a relatively similar increase (~3 fold) in the levels of BDNF and pro-BDNF (lane 3) compared to wild-type lysates (lanes 1 and 2). Recombinant mouse BDNF (lanes 4-6, 8, 10) was used as a molecular weight marker.</legend><legend>Confocal z-slice of area CA3 of a wild-type mouse hippocampus, demonstrating BDNF-IR (red) and  pro-BDNF-IR (green) in a subset of CA3 pyramidal cell somata. DAPI staining is shown in blue.</legend><legend>Confocal z-stack of a wild-type mouse granule cell co-expressing  Myc-IR (red) and Met-enk-IR (green). Puncta are similarly distributed throughout the cell but show little overlap.</legend><legend>Immunoprecipitation with anti-pro-BDNF antisera and Western blot analysis with anti-pro-BDNF monoclonal antibody 5H8 of hippocampal lysates from Bsn mouse mutants revealed a relatively similar increase (~3 fold) in the levels of  pro-peptide and pro-BDNF (lane 2), compared to wild-type tissues (lane 1). Recombinant BDNF pro-peptide (lanes 3,4,5)  and cleavage-resistant pro-BDNF (lanes 3,4,6) were used as molecular weight markers.</legend><legend>High resolution confocal z-slice of a wild-type mouse stratum lucidum showing Myc-IR (red) and  pro-BDNF-IR (green) in the same subset of mossy fiber boutons.</legend><legend>Higher magnification view of the CA3 region of a cbdnf-/- mouse hippocampus stained with anti-BDNF antibodies (red). Note the absence of immunoreactive signals in all cellular and neuropil layers.</legend><legend>Electron micrograph showing immunogold labeling of an anti-pro-BDNF-positive vesicle within a wild-type mouse mossy fiber that can been seen terminating into a bouton.</legend><repository>bioimages</repository><figure_sub>Image 38335 (Figure 5 - D)</figure_sub><figure_sub>Figure 8 - C</figure_sub><figure_sub>Image 38337 (Figure 6 - H)</figure_sub><figure_sub>Figure 8 - D</figure_sub><figure_sub>Figure 8 - A</figure_sub><figure_sub>Figure 8 - B</figure_sub><figure_sub>Image 38301 (Figure 1 - C)</figure_sub><figure_sub>Image 38339 (Figure 6 - K)</figure_sub><figure_sub>Image 38427 (Supplemental Figure 1 - D)</figure_sub><figure_sub>Image 38388 (Figure 2 - A-C)</figure_sub><figure_sub>Image 38420 (Figure 7 - G, H)</figure_sub><figure_sub>Figure 10 - C, left panel</figure_sub><figure_sub>Image 38349 (Figure 9 - B)</figure_sub><figure_sub>Image 38308 (Figure 1 - J)</figure_sub><figure_sub>Image 38419 (Figure 7 - G, H)</figure_sub><figure_sub>Image 38329 (Figure 4 - D)</figure_sub><figure_sub>Figure 2 - G-J</figure_sub><figure_sub>Figure 1 - I</figure_sub><figure_sub>Figure 1 - H</figure_sub><figure_sub>Image 38418 (Figure 7 - E, F)</figure_sub><figure_sub>Figure 1 - G</figure_sub><figure_sub>Figure 1 - F</figure_sub><figure_sub>Figure 3 - Q-S</figure_sub><figure_sub>Image 38426 (Supplemental Figure 1 - A-C)</figure_sub><figure_sub>Image 38306 (Figure 1 - H)</figure_sub><figure_sub>Figure 1 - J</figure_sub><figure_sub>Image 38392 (Figure 2 - G-J)</figure_sub><figure_sub>Figure 1 - E</figure_sub><figure_sub>Figure 1 - D</figure_sub><figure_sub>Figure 1 - C</figure_sub><figure_sub>Image 38342 (Figure 8 - B)</figure_sub><figure_sub>Figure 1 - B</figure_sub><figure_sub>Figure 7 - I, J</figure_sub><figure_sub>Figure 10 - C, right panel</figure_sub><figure_sub>Figure 7 - A, B</figure_sub><figure_sub>Image 38330 (Figure 4 - A)</figure_sub><figure_sub>Image 38401 (Figure 3 - G)</figure_sub><figure_sub>Image 38327 (Figure 4 - B)</figure_sub><figure_sub>Image 38320 (Figure 2 - K)</figure_sub><figure_sub>Figure 3 - D</figure_sub><figure_sub>Figure 3 - E</figure_sub><figure_sub>Figure 3 - F</figure_sub><figure_sub>Figure 3 - G</figure_sub><figure_sub>Image 133118 (Supplemental Figure 2 - None)</figure_sub><figure_sub>Figure 6 - A-C</figure_sub><figure_sub>Image 38305 (Figure 1 - G)</figure_sub><figure_sub>Figure 2 - D-F</figure_sub><figure_sub>Image 38340 (Figure 6 - L)</figure_sub><figure_sub>Image 38428 (Supplemental Figure 1 - E)</figure_sub><figure_sub>Image 38396 (Figure 3 - E)</figure_sub><figure_sub>Figure 5 - A</figure_sub><figure_sub>Figure 5 - B</figure_sub><figure_sub>Figure 5 - C</figure_sub><figure_sub>Figure 5 - D</figure_sub><figure_sub>Image 38422 (Figure 7 - I, J)</figure_sub><figure_sub>Figure 5</figure_sub><figure_sub>Image 38429 (Supplemental Figure 1 - F)</figure_sub><figure_sub>Figure 4</figure_sub><figure_sub>Figure 7 - G, H</figure_sub><figure_sub>Supplemental Figure 2 - None</figure_sub><figure_sub>Figure 7</figure_sub><figure_sub>Figure 6</figure_sub><figure_sub>Figure 10</figure_sub><figure_sub>Figure 9</figure_sub><figure_sub>Figure 8</figure_sub><figure_sub>Image 38303 (Figure 1 - E)</figure_sub><figure_sub>Figure 3 - H-J</figure_sub><figure_sub>Image 38351 (Figure 10 - A)</figure_sub><figure_sub>Image 38333 (Figure 5 - B)</figure_sub><figure_sub>Figure 1</figure_sub><figure_sub>Figure 2 - A-C, inset</figure_sub><figure_sub>Figure 3</figure_sub><figure_sub>Supplemental Figure 1 - A-C</figure_sub><figure_sub>Figure 2</figure_sub><figure_sub>Supplemental Figure 1 - F</figure_sub><figure_sub>Figure 10 - A</figure_sub><figure_sub>Supplemental Figure 2</figure_sub><figure_sub>Image 38307 (Figure 1 - I)</figure_sub><figure_sub>Supplemental Figure 1 - E</figure_sub><figure_sub>Supplemental Figure 1</figure_sub><figure_sub>Supplemental Figure 1 - D</figure_sub><figure_sub>Image 38409 (Figure 3 - Q-S)</figure_sub><figure_sub>Image 38328 (Figure 4 - C)</figure_sub><figure_sub>Image 38416 (Figure 7 - C, D)</figure_sub><figure_sub>Figure 9 - B</figure_sub><figure_sub>Figure 9 - C</figure_sub><figure_sub>Image 38437 (Figure 10 - C, left panel)</figure_sub><figure_sub>Figure 9 - D</figure_sub><figure_sub>Image 38300 (Figure 1 - B)</figure_sub><figure_sub>Figure 9 - A</figure_sub><figure_sub>Image 38338 (Figure 6 - I)</figure_sub><figure_sub>Image 38341 (Figure 8 - A)</figure_sub><figure_sub>Image 38393 (Figure 3 - A-C)</figure_sub><figure_sub>Image 38405 (Figure 3 - K-M)</figure_sub><figure_sub>Figure 3 - K-M</figure_sub><figure_sub>Image 38424 (Figure 7 - K, L)</figure_sub><figure_sub>Figure 2 - K</figure_sub><figure_sub>Figure 7 - E, F</figure_sub><figure_sub>Image 38415 (Figure 7 - C, D)</figure_sub><figure_sub>Image 38389 (Figure 2 - A-C, inset)</figure_sub><figure_sub>Image 38408 (Figure 3 - N-P)</figure_sub><figure_sub>Image 38343 (Figure 8 - C)</figure_sub><figure_sub>Image 38414 (Figure 7 - A, B)</figure_sub><figure_sub>Figure 3 - A-C</figure_sub><figure_sub>Image 38347 (Figure 9 - A)</figure_sub><figure_sub>Image 38348 (Figure 9 - C)</figure_sub><figure_sub>Image 38304 (Figure 1 - F)</figure_sub><figure_sub>Image 38411 (Figure 6 - A-C)</figure_sub><figure_sub>Image 38332 (Figure 5 - A)</figure_sub><figure_sub>Image 38425 (Figure 7 - K, L)</figure_sub><figure_sub>Image 38395 (Figure 3 - D)</figure_sub><figure_sub>Image 38417 (Figure 7 - E, F)</figure_sub><figure_sub>Image 38438 (Figure 10 - C, right panel)</figure_sub><figure_sub>Image 38344 (Figure 8 - D)</figure_sub><figure_sub>Figure 4 - A</figure_sub><figure_sub>Figure 4 - B</figure_sub><figure_sub>Image 38444 (Figure 6 - D-G)</figure_sub><figure_sub>Image 38421 (Figure 7 - I, J)</figure_sub><figure_sub>Figure 4 - C</figure_sub><figure_sub>Figure 4 - D</figure_sub><figure_sub>Figure 6 - K</figure_sub><figure_sub>Figure 6 - L</figure_sub><figure_sub>Figure 2 - A-C</figure_sub><figure_sub>Figure 6 - I</figure_sub><figure_sub>Image 38399 (Figure 3 - F)</figure_sub><figure_sub>Figure 3 - N-P</figure_sub><figure_sub>Figure 7 - K, L</figure_sub><figure_sub>Image 38404 (Figure 3 - H-J)</figure_sub><figure_sub>Image 38334 (Figure 5 - C)</figure_sub><figure_sub>Figure 6 - D-G</figure_sub><figure_sub>Image 38350 (Figure 9 - D)</figure_sub><figure_sub>Image 38302 (Figure 1 - D)</figure_sub><figure_sub>Figure 7 - C, D</figure_sub><figure_sub>Figure 6 - H</figure_sub><figure_sub>Image 38391 (Figure 2 - D-F)</figure_sub><pubmed_authors>Ruben Deogracias</pubmed_authors><pubmed_authors>Masami Kojima</pubmed_authors><pubmed_authors>Michael Frotscher</pubmed_authors><pubmed_authors>Tomoya Matsumoto</pubmed_authors><pubmed_authors>Yves-Alain Barde</pubmed_authors><pubmed_authors>Martijn Dekkers</pubmed_authors><pubmed_authors>Stefanie Rauskolb</pubmed_authors><pubmed_authors>Sandra Dieni</pubmed_authors><pubmed_authors>Eckart D. Gundelfinger</pubmed_authors><pubmed_authors>Sigrun Nestel</pubmed_authors><pubmed_authors>Mihai S. Ionescu</pubmed_authors></additional><is_claimable>false</is_claimable><name>BDNF and its pro-peptide are stored in presynaptic dense core vesicles in brain neurons</name><description/><dates><release>2012-03-12T11:23:11Z</release><modification>2018-11-29T11:23:11Z</modification><creation>2018-11-29T11:23:11Z</creation></dates><accession>S-JCBD-201201038</accession><cross_references><doi>10.1083/jcb.201201038</doi></cross_references></HashMap>