<HashMap><database>BioModels</database><file_versions><headers><Content-Type>application/xml</Content-Type></headers><body><files><Txt>https://www.ebi.ac.uk/biomodels/model/download/BIOMD0000000946?filename=curation_notes.txt</Txt><Owl>https://www.ebi.ac.uk/biomodels/model/download/BIOMD0000000946?filename=Evans2005-biopax3.owl</Owl><Owl>https://www.ebi.ac.uk/biomodels/model/download/BIOMD0000000946?filename=Evans2005-biopax2.owl</Owl><Xml>https://www.ebi.ac.uk/biomodels/model/download/BIOMD0000000946?filename=manifest.xml</Xml><Xml>https://www.ebi.ac.uk/biomodels/model/download/BIOMD0000000946?filename=Evans2005.xml</Xml><Other>https://www.ebi.ac.uk/biomodels/model/download/BIOMD0000000946?filename=metadata.rdf</Other><Other>https://www.ebi.ac.uk/biomodels/model/download/BIOMD0000000946?filename=Evans2005.cps</Other><Other>https://www.ebi.ac.uk/biomodels/model/download/BIOMD0000000946?filename=figure2_abc_pH7.png</Other><Other>https://www.ebi.ac.uk/biomodels/model/download/BIOMD0000000946?filename=Evans2005-octave.m</Other><Other>https://www.ebi.ac.uk/biomodels/model/download/BIOMD0000000946?filename=Evans2005-matlab.m</Other><Other>https://www.ebi.ac.uk/biomodels/model/download/BIOMD0000000946?filename=curation_image.png</Other><Other>https://www.ebi.ac.uk/biomodels/model/download/BIOMD0000000946?filename=Evans2005.sedml</Other><Other>https://www.ebi.ac.uk/biomodels/model/download/BIOMD0000000946?filename=Evans2005.ode</Other></files><type>primary</type></body><statusCodeValue>200</statusCodeValue><statusCode>OK</statusCode></file_versions><scores/><additional><submitter>Matthew Roberts</submitter><curationStatus>Manually curated</curationStatus><modellingApproach>ordinary differential equation model</modellingApproach><levelVersion>L2V4</levelVersion><full_dataset_link>https://www.ebi.ac.uk/biomodels/BIOMD0000000946</full_dataset_link><isPrivate>false</isPrivate><repository>BioModels</repository><modelFormat>SBML</modelFormat><omics_type>Models</omics_type><tokenised_name>Evans2005   Compartmental model for antineoplastic drug topotecan in breast cancer cells</tokenised_name><publication_year>2005</publication_year><submissionId>MODEL1805210001</submissionId><publication_authors>Neil D. Evans, Rachel J. Errington, Michael J. Chapman, Paul J. Smith, Michael J. Chappell, Keith R. Godfrey</publication_authors><first_author>Neil D. Evans</first_author><publication>10.1002/acs.856,
                            A compartmental model for the in vitro uptake kinetics of the anti-cancer agent topotecan is proposed. This model provides a description of the activity of the drug, and subsequent delivery of active form to the nuclear DNA target. The unknown model parameters are estimated from two-photon laser-scanning microscopy data, which provide concentrations of topotecan (active plus inactive forms) in the extracellular region containing live human breast tumour cells (MCF-7 cell line), the cytoplasm and the nucleus. This determines an output structure for which the model is uniquely identifiable, that is, the unknown parameters are uniquely determined from noise-free, continuous and perfect data. The
model allows in silico predictions of the dose dependence of target binding. Copyright 2005 John Wiley &amp; Sons, Ltd.. null, 19.
                            School of Engineering, University of Warwick, Coventry CV4 7AL, U.K. Department of Medical Biochemistry, University of Wales College of Medicine, Cardiff CF14 4XN, U.K. School of MIS-Mathematics, Coventry University, Coventry CV1 5FB, U.K. Department of Pathology, University of Wales College of Medicine, Cardiff CF14 4XN, U.K</publication><submitter_mail>mroberts@ebi.ac.uk</submitter_mail><publication_doi>10.1002/acs.856</publication_doi><submitter_affiliation>EMBL-EBI</submitter_affiliation><publicationId>BIOMD0000000946</publicationId><pubmed_abstract>In this paper a compartmental modelling approach is applied to provide a mathematical description of the activity of the anti-cancer agent topotecan, and delivery to its nuclear DNA target following administration. The activity of topotecan in defined buffers is first modelled using a linear two compartment model that then forms the basis of a cell based model for drug activity in live cell experiments. An identifiability analysis is performed before parameter estimation to ensure that the model output (i.e., continuous, perfect and noise-free data) uniquely determines the parameters. Parameter estimation is performed using experimental data which offers concentrations of active and inactive forms of topotecan from high performance liquid chromatography methods.</pubmed_abstract><pubmed_title>A mathematical model for the in vitro kinetics of the anti-cancer agent topotecan.</pubmed_title><pubmed_authors>Evans Neil D ND, Errington Rachel J RJ, Shelley Michael M, Feeney Graham P GP, Chapman Michael J MJ, Godfrey Keith R KR, Smith Paul J PJ, Chappell Michael J MJ</pubmed_authors></additional><is_claimable>false</is_claimable><name>Evans2005 - Compartmental model for antineoplastic drug topotecan in breast cancer cells</name><description>
      
     Compartment model for the antineoplastic drug topotecan. Modelling drug in its active lactone and inactive hydroxy acid forms in the medium, extracellular, cytoplasm and nucleus.
  
    </description><dates><last_modification>2024-08-22</last_modification><publication>2024-09-02</publication><submission>2018-05-21</submission></dates><accession>BIOMD0000000946</accession><cross_references><sbo>SBO:0000587</sbo><sbo>SBO:0000338</sbo><sbo>SBO:0000189</sbo><sbo>SBO:0000468</sbo><pubmed>15094319</pubmed><chebi>CHEBI:63632</chebi><chebi>CHEBI:70727</chebi><chebi>CHEBI:25000</chebi><chebi>CHEBI:35610</chebi><chebi>CHEBI:35868</chebi><chebi>CHEBI:16991</chebi><obi>OBI:0001285</obi><biomodels__db>MODEL1805210001</biomodels__db><biomodels__db>BIOMD0000000946</biomodels__db><pw>PW:0002367</pw><pato>PATO:0002355</pato><go>GO:0005634</go><go>GO:0005576</go><go>GO:0005737</go><go>GO:0065004</go><go>GO:0015562</go><go>GO:0005488</go><kegg__compound>C11158</kegg__compound><taxonomy>9606</taxonomy><bto>BTO:0000093</bto><bto>BTO:0000316</bto><efo>EFO:0000428</efo><doi>10.1002/acs.856</doi></cross_references></HashMap>