<HashMap><database>biostudies-arrayexpress</database><scores/><additional><submitter/><organism>Mus musculus</organism><full_dataset_link>https://www.ebi.ac.uk/biostudies/studies/E-MTAB-14304</full_dataset_link><description>Analysis of the global variability of gene expression between the Eif6 WT control genotype (CTRL)  and the Eif6 S235A mutated (SA) MEF lines. To analyze the effects over time of the lack of Eif6 phosphorylation, we transduced MEFs with tamoxifen-inducible Cre, so that treatment leads to excision of wild-type exons and the generation of cells bearing the S235A mutation. The analysis is done on three replicates per genotype.</description><repository>biostudies-arrayexpress</repository><sample_protocol>Sample Collection - Immortalized MEF cells were washed once with ice-cold PBS 10ug/ml cyclohexamide.</sample_protocol><sample_protocol>Library Construction - Novogene WTS</sample_protocol><sample_protocol>Nucleic Acid Extraction - RNA was extraced using TRIzol™ Reagent (Invitrogen) following manufacturer's instructions</sample_protocol><sample_protocol>Sequencing - Novogene WTS paired-end 150</sample_protocol><figure_sub>MINSEQE Score</figure_sub><figure_sub>Assays and Data</figure_sub><figure_sub>organisation</figure_sub><figure_sub>MAGE-TAB Files</figure_sub><omics_type>Metabolomics</omics_type><omics_type>Unknown</omics_type><omics_type>Transcriptomics</omics_type><omics_type>Genomics</omics_type><omics_type>Proteomics</omics_type><instrument_platform>Illumina NovaSeq 6000</instrument_platform><study_type>RNA-seq of total RNA</study_type><species>Mus musculus</species><additional_accession>ERP162814</additional_accession><pubmed_authors>Ivan Ferrari</pubmed_authors></additional><is_claimable>false</is_claimable><name>RNA-seq of Eif6 WT and Eif6 S235A Mouse Embryonic Fibroblasts (MEFs)</name><description>Analysis of the global variability of gene expression between the Eif6 WT control genotype (CTRL)  and the Eif6 S235A mutated (SA) MEF lines. To analyze the effects over time of the lack of Eif6 phosphorylation, we transduced MEFs with tamoxifen-inducible Cre, so that treatment leads to excision of wild-type exons and the generation of cells bearing the S235A mutation. The analysis is done on three replicates per genotype.</description><dates><release>2026-02-10T00:00:00Z</release><modification>2026-02-10T09:32:30.532Z</modification><creation>2024-07-29T21:37:39.288Z</creation></dates><accession>E-MTAB-14304</accession><cross_references><ENA>ERP162814</ENA><EFO>EFO_0002944</EFO><EFO>EFO_0004170</EFO><EFO>EFO_0009653</EFO><EFO>EFO_0005518</EFO><EFO>EFO_0004184</EFO></cross_references></HashMap>