<HashMap><database>biostudies-arrayexpress</database><scores/><additional><submitter/><organism>Arabidopsis thaliana</organism><full_dataset_link>https://www.ebi.ac.uk/biostudies/studies/E-MTAB-14426</full_dataset_link><description>This experiment aims to analyze crossover distribution in Arabidopsis female and male meiosis. The heterozygous mutant plants in Col-0 and Ler were crossed as females and males respectively. Wild-type and homozygous mutant plants were selected among the F1s and crossed as female or as male with wild-type Col-0. Leaf samples from the four back-crossed populations were used for DNA purification and library preparation for Illumina sequencing (NextSeq 2000 2×150 base pairs [bp]), performed at the Max Planck-Genome-center (https://mpgc.mpipz.mpg.de/home/).</description><repository>biostudies-arrayexpress</repository><sample_protocol>Sample Collection - Leaves were removed from plants and stored at -80 C until DNA extraction</sample_protocol><sample_protocol>Growth Protocol - Greenhouse supplemented with additional light. Plants grown in the greenhouse (16 h day/8 h night) for 3 weeks and 4 days in the dark</sample_protocol><sample_protocol>Library Construction - TPase-based DNA library (>95 samples)</sample_protocol><sample_protocol>Sequencing - Illumina NextSeq 2000</sample_protocol><sample_protocol>Nucleic Acid Extraction - NucleoMag Plant Kit (Macherey and Nagel, P/O 744400.4) on a robotic device (KingFisher, Thermo)</sample_protocol><figure_sub>MINSEQE Score</figure_sub><figure_sub>Assays and Data</figure_sub><figure_sub>organisation</figure_sub><figure_sub>MAGE-TAB Files</figure_sub><omics_type>Metabolomics</omics_type><omics_type>Unknown</omics_type><omics_type>Transcriptomics</omics_type><omics_type>Genomics</omics_type><omics_type>Proteomics</omics_type><instrument_platform>NextSeq 2000</instrument_platform><study_type>DNA-seq</study_type><species>Arabidopsis thaliana</species><additional_accession>E-MTAB-9593</additional_accession><pubmed_authors>Qichao Lian</pubmed_authors><pubmed_authors>Raphael Mercier</pubmed_authors></additional><is_claimable>false</is_claimable><name>Whole-genome resequencing of BC1 populations from Arabidopsis (Col x Ler) x Col crosses (recq4ab_HEI10oe)</name><description>This experiment aims to analyze crossover distribution in Arabidopsis female and male meiosis. The heterozygous mutant plants in Col-0 and Ler were crossed as females and males respectively. Wild-type and homozygous mutant plants were selected among the F1s and crossed as female or as male with wild-type Col-0. Leaf samples from the four back-crossed populations were used for DNA purification and library preparation for Illumina sequencing (NextSeq 2000 2×150 base pairs [bp]), performed at the Max Planck-Genome-center (https://mpgc.mpipz.mpg.de/home/).</description><dates><release>2025-05-09T00:00:00Z</release><modification>2026-06-05T11:00:27.033Z</modification><creation>2024-09-05T16:04:51.419Z</creation></dates><accession>E-MTAB-14426</accession><cross_references><ENA>ERP163879</ENA><Biostudies>E-MTAB-14427</Biostudies><Biostudies>E-MTAB-14428</Biostudies><Biostudies>E-MTAB-14423</Biostudies><Biostudies>E-MTAB-14422</Biostudies><Biostudies>E-MTAB-14425</Biostudies><Biostudies>E-MTAB-14424</Biostudies><Biostudies>E-MTAB-14430</Biostudies><Biostudies>E-MTAB-9593</Biostudies><Biostudies>E-MTAB-11696</Biostudies><Biostudies>E-MTAB-11254</Biostudies><EFO>EFO_0002944</EFO><EFO>EFO_0004170</EFO><EFO>EFO_0003789</EFO><EFO>EFO_0002693</EFO><EFO>EFO_0005518</EFO><EFO>EFO_0004184</EFO></cross_references></HashMap>