biostudies-arrayexpressAssa ShermanHomo sapienshttps://www.ebi.ac.uk/biostudies/studies/E-MTAB-15038We used constitutive construct to OE lncVRTN, or siRNAs to induce KD of lncVRTN or lncOCT4 in hESC and examine its transcriptomic effects.biostudies-arrayexpressLibrary Construction - KAPA stranded mRNA-seq kitSequencing - TruSeqNucleic Acid Extraction - Qiagen RNeasy kitSample Collection - Harvested using TrypsinOrganizationMINSEQE ScoreAssays and DataProcessed DataMAGE-TAB FilesSequence Alignment - Reads were aligned to GRCh38 using STARData Transformation - No normalization performed (raw counts from STAR output)MetabolomicsUnknownTranscriptomicsGenomicsProteomicsNextSeq 2000RNA-seq of total RNAHomo sapiensAssa ShermanfalseTranscriptome analysis of human embryonic stem cells (hESCs) upon lncVRTN OE or siRNA-mediated knockdown of lncVRTN or lncOCT4We used constitutive construct to OE lncVRTN, or siRNAs to induce KD of lncVRTN or lncOCT4 in hESC and examine its transcriptomic effects.2025-12-18T00:00:00Z2025-12-18T02:01:45.943Z2025-04-15T13:34:58.041ZE-MTAB-15038ERP171659E-MTAB-15032EFO_0002944EFO_0004170EFO_0009653EFO_0004917EFO_0005518EFO_0003816EFO_0004184