{"database":"biostudies-arrayexpress","file_versions":[],"scores":null,"additional":{"omics_type":["Unknown","Transcriptomics","Genomics","Proteomics"],"submitter":["Dussaud sébastien"],"instrument_platform":["Illumina NovaSeq 6000"],"study_type":["RNA-seq of coding RNA"],"organism":["Mus musculus"],"species":["Mus musculus"],"full_dataset_link":["https://www.ebi.ac.uk/biostudies/studies/E-MTAB-15260"],"description":["Kupffer cells were sorted from the liver of WT mice and Atg5-specific deficient Kupffer cells mice. RNAs were extracted from the Kupffer cells and we performed an RNA-seq on these cells."],"repository":["biostudies-arrayexpress"],"sample_protocol":["Library Construction - cDNA libraries were generated using the KAPA mRNA HyperPrep kit (Roche).","Sample Collection - Kupffer cells mRNA prep Nucleospin RNA plus (Macherey Nagel)","Nucleic Acid Extraction - RNAs from sorted cells were prepared using the RNeasy Plus micro kit (Qiagen).","Sequencing - RNA-Seq libraries were sequenced on an Illumina NovaSeq 6000."],"figure_sub":["Organization","MINSEQE Score","Assays and Data","MAGE-TAB Files"],"pubmed_authors":["Dussaud sébastien"],"additional_accession":[]},"is_claimable":false,"name":"RNA-seq of Kupffer cells isolated from WT mice and Atg5-specific deficient Kupffer cells mice","description":"Kupffer cells were sorted from the liver of WT mice and Atg5-specific deficient Kupffer cells mice. RNAs were extracted from the Kupffer cells and we performed an RNA-seq on these cells.","dates":{"release":"2026-03-24T00:00:00Z","modification":"2026-03-24T02:03:19.883Z","creation":"2025-06-25T13:43:45.464Z"},"accession":"E-MTAB-15260","cross_references":{"ENA":["ERP174029"],"EFO":["EFO_0002944","EFO_0004170","EFO_0005518","EFO_0003738","EFO_0004184"]}}