<HashMap><database>biostudies-arrayexpress</database><scores/><additional><omics_type>Unknown</omics_type><omics_type>Transcriptomics</omics_type><omics_type>Genomics</omics_type><omics_type>Proteomics</omics_type><submitter>Dussaud sébastien</submitter><instrument_platform>Illumina NovaSeq 6000</instrument_platform><study_type>RNA-seq of coding RNA</study_type><organism>Mus musculus</organism><species>Mus musculus</species><full_dataset_link>https://www.ebi.ac.uk/biostudies/studies/E-MTAB-15260</full_dataset_link><description>Kupffer cells were sorted from the liver of WT mice and Atg5-specific deficient Kupffer cells mice. RNAs were extracted from the Kupffer cells and we performed an RNA-seq on these cells.</description><repository>biostudies-arrayexpress</repository><sample_protocol>Library Construction - cDNA libraries were generated using the KAPA mRNA HyperPrep kit (Roche).</sample_protocol><sample_protocol>Sample Collection - Kupffer cells mRNA prep Nucleospin RNA plus (Macherey Nagel)</sample_protocol><sample_protocol>Nucleic Acid Extraction - RNAs from sorted cells were prepared using the RNeasy Plus micro kit (Qiagen).</sample_protocol><sample_protocol>Sequencing - RNA-Seq libraries were sequenced on an Illumina NovaSeq 6000.</sample_protocol><figure_sub>Organization</figure_sub><figure_sub>MINSEQE Score</figure_sub><figure_sub>Assays and Data</figure_sub><figure_sub>MAGE-TAB Files</figure_sub><pubmed_authors>Dussaud sébastien</pubmed_authors></additional><is_claimable>false</is_claimable><name>RNA-seq of Kupffer cells isolated from WT mice and Atg5-specific deficient Kupffer cells mice</name><description>Kupffer cells were sorted from the liver of WT mice and Atg5-specific deficient Kupffer cells mice. RNAs were extracted from the Kupffer cells and we performed an RNA-seq on these cells.</description><dates><release>2026-03-24T00:00:00Z</release><modification>2026-03-24T02:03:19.883Z</modification><creation>2025-06-25T13:43:45.464Z</creation></dates><accession>E-MTAB-15260</accession><cross_references><ENA>ERP174029</ENA><EFO>EFO_0002944</EFO><EFO>EFO_0004170</EFO><EFO>EFO_0005518</EFO><EFO>EFO_0003738</EFO><EFO>EFO_0004184</EFO></cross_references></HashMap>