{"database":"biostudies-arrayexpress","file_versions":[],"scores":null,"additional":{"omics_type":["Unknown","Transcriptomics","Genomics","Proteomics"],"submitter":["Marek Marzec"],"instrument_platform":["Illumina NovaSeq 6000"],"study_type":["RNA-seq of coding RNA"],"organism":["Arabidopsis thaliana"],"species":["Arabidopsis thaliana"],"full_dataset_link":["https://www.ebi.ac.uk/biostudies/studies/E-MTAB-15333"],"description":["Arabidopsis thaliana plants (WT, SL biosynthesis mutant - max3) were mechanically wounded, Transcriptome response to wounding was analysed after 3 h"],"repository":["biostudies-arrayexpress"],"sample_protocol":["Sequencing - Preparation of RNA library was conducted by Novogene Co., LTD (Beijing, China).","Sample Collection - For RNA-isolation analyses, plant tissue (shoot or root) was collected in four biological replicates, each containing tissue from 4 seedlings.","Nucleic Acid Extraction - Samples were frozen immediately in liquid nitrogen; RNA was isolated using the mirVana miRNA Isolation Kit (Sigma, catalogue number: AM1560).","Growth Protocol - For the RNAseq experiment, plants were grown on Perti dish with 1/2 MS up to 28 days. 12 plants were placed on the single Petri dish. Plants were placed in the greenhouse under a 20/18°C day/night, 16/8 photoperiod and 420 μE m−2 s−1 light intensity.","Library Construction - Preparation of RNA library was conducted by Novogene Co., LTD (Beijing, China)."],"figure_sub":["Organization","MINSEQE Score","Assays and Data","MAGE-TAB Files"],"pubmed_authors":["Marek Marzec"],"additional_accession":[]},"is_claimable":false,"name":"Role of strigolactones in response to wounding in Arabidopsis","description":"Arabidopsis thaliana plants (WT, SL biosynthesis mutant - max3) were mechanically wounded, Transcriptome response to wounding was analysed after 3 h","dates":{"release":"2026-03-02T00:00:00Z","modification":"2026-03-02T02:02:03.846Z","creation":"2025-07-08T23:39:08.95Z"},"accession":"E-MTAB-15333","cross_references":{"ENA":["ERP175057"],"EFO":["EFO_0002944","EFO_0004170","EFO_0003789","EFO_0005518","EFO_0003738","EFO_0004184"]}}