<HashMap><database>biostudies-arrayexpress</database><scores/><additional><submitter>Bobak Parang</submitter><organism>Homo sapiens</organism><full_dataset_link>https://www.ebi.ac.uk/biostudies/studies/E-MTAB-15738</full_dataset_link><description>A549 cells transduced with shRNA against scr (control) or MMAB (904 or 906).</description><repository>biostudies-arrayexpress</repository><sample_protocol>Sample Collection - Cells were infected with lentivirus containing shSCR or two hairpins against MMAB. Cells were selected with puromycin for 5 days. After selection, cells were plated in 10cm plates and after 48 hours, RNA was extracted.</sample_protocol><sample_protocol>Sequencing - Weill Cornell Medicine genomics core performed the nucleic acid sequencing</sample_protocol><sample_protocol>Growth Protocol - Cells were grown in full media with either shSCR, shMMAB#1 or shMMAB#2</sample_protocol><sample_protocol>Nucleic Acid Extraction - RNA extraction was done in accordance with Qiagen kit.</sample_protocol><sample_protocol>Library Construction - Weill Cornell Medicine genomics core constructed the library.</sample_protocol><figure_sub>Organization</figure_sub><figure_sub>MINSEQE Score</figure_sub><figure_sub>Assays and Data</figure_sub><figure_sub>Processed Data</figure_sub><figure_sub>MAGE-TAB Files</figure_sub><data_protocol>Data Transformation - Data was normalized according to Weill Cornell Genomics protocol</data_protocol><omics_type>Metabolomics</omics_type><omics_type>Unknown</omics_type><omics_type>Transcriptomics</omics_type><omics_type>Genomics</omics_type><omics_type>Proteomics</omics_type><instrument_platform>Illumina NovaSeq X</instrument_platform><study_type>RNA-seq of coding RNA</study_type><species>Homo sapiens</species><pubmed_authors>Bobak Parang</pubmed_authors></additional><is_claimable>false</is_claimable><name>A549 MMAB knockdown</name><description>A549 cells transduced with shRNA against scr (control) or MMAB (904 or 906).</description><dates><release>2025-10-30T00:00:00Z</release><modification>2026-05-27T17:36:18.615Z</modification><creation>2025-10-15T14:42:21.261Z</creation></dates><accession>E-MTAB-15738</accession><cross_references><ENA>ERP182242</ENA><EFO>EFO_0002944</EFO><EFO>EFO_0004170</EFO><EFO>EFO_0003789</EFO><EFO>EFO_0005518</EFO><EFO>EFO_0003816</EFO><EFO>EFO_0003738</EFO><EFO>EFO_0004184</EFO></cross_references></HashMap>