<HashMap><database>biostudies-arrayexpress</database><scores/><additional><omics_type>Metabolomics</omics_type><omics_type>Unknown</omics_type><omics_type>Transcriptomics</omics_type><omics_type>Genomics</omics_type><omics_type>Proteomics</omics_type><submitter>Chantal Wientjens</submitter><instrument_platform>Illumina HiSeq 2500</instrument_platform><study_type>RNA-seq of coding RNA</study_type><organism>Mus musculus</organism><species>Mus musculus</species><full_dataset_link>https://www.ebi.ac.uk/biostudies/studies/E-MTAB-15989</full_dataset_link><description>Type 2 Innate Lymphoid cells (ILC2)  play a crucial role in allergic airway inflammation. To identify transcriptional differences between naive ILC2 and allergen induced ILC2, mice were challenged with PBS control or papain on days 0, 3, 6 and 13. On day 14 ILC2 were isolated, sort-purified and sequenced.</description><repository>biostudies-arrayexpress</repository><sample_protocol>Nucleic Acid Extraction - RNA was isolated with Trizol.</sample_protocol><sample_protocol>Sample Collection - Lungs were isolated from the mice and processed to obtain cells in a single cell suspension. ILC2 were sorted by FACS.</sample_protocol><sample_protocol>Sequencing - Library preparation was performed using the QuantSeq 3´ mRNA-Seq Library Prep kit (Lexogen) according to manufacturer´s instructions.</sample_protocol><sample_protocol>Library Construction - Library preparation was performed using the QuantSeq 3´ mRNA-Seq Library Prep kit (Lexogen) according to manufacturer´s instructions.</sample_protocol><figure_sub>Organization</figure_sub><figure_sub>MINSEQE Score</figure_sub><figure_sub>Assays and Data</figure_sub><figure_sub>MAGE-TAB Files</figure_sub><pubmed_authors>Christoph Wilhelm</pubmed_authors><pubmed_authors>Chantal Wientjens</pubmed_authors></additional><is_claimable>false</is_claimable><name>Bulk RNA-Seq of lung Type 2 Innate Lymphoid cells (ILC2) in response to papain</name><description>Type 2 Innate Lymphoid cells (ILC2)  play a crucial role in allergic airway inflammation. To identify transcriptional differences between naive ILC2 and allergen induced ILC2, mice were challenged with PBS control or papain on days 0, 3, 6 and 13. On day 14 ILC2 were isolated, sort-purified and sequenced.</description><dates><release>2025-12-10T00:00:00Z</release><modification>2025-12-10T02:01:20.371Z</modification><creation>2025-11-06T11:39:06.383Z</creation></dates><accession>E-MTAB-15989</accession><cross_references><ENA>ERP183696</ENA><EFO>EFO_0002944</EFO><EFO>EFO_0004170</EFO><EFO>EFO_0005518</EFO><EFO>EFO_0003738</EFO><EFO>EFO_0004184</EFO></cross_references></HashMap>