<HashMap><database>biostudies-arrayexpress</database><scores/><additional><omics_type>Unknown</omics_type><omics_type>Transcriptomics</omics_type><omics_type>Genomics</omics_type><omics_type>Proteomics</omics_type><submitter>Zhi-Wei Wang</submitter><instrument_platform>DNBSEQ-T7</instrument_platform><study_type>RNA-seq of coding RNA</study_type><organism>Vigna radiata</organism><species>Vigna radiata</species><full_dataset_link>https://www.ebi.ac.uk/biostudies/studies/E-MTAB-16409</full_dataset_link><description>This study presents transcriptome profiles of multiple tissues (root, stem, leaf, flower, and pod) from Vigna radiata var. sublobata, a wild relative of cultivated mung bean. RNA sequencing was performed using Illumina platform to investigate tissue-specific gene expression patterns. The data will facilitate understanding of gene regulation in different plant organs and provide resources for comparative genomics with cultivated Vigna radiata.  Experimental design: Tissues were collected from mature plants grown under controlled conditions. Three biological replicates per tissue type. Libraries were prepared using poly-A selection and sequenced in paired-end mode (2x150 bp).  This submission includes raw sequencing data (FASTQ files) for all samples.</description><repository>biostudies-arrayexpress</repository><sample_protocol>Sequencing - Libraries were sequenced on Illumina NovaSeq 6000 platform in paired-end mode (2×150 bp) following manufacturer's standard protocols.</sample_protocol><sample_protocol>Sample Collection - Samples of different tissues were collected from mature Vigna radiata var. sublobata plants grown in experimental field. Samples were immediately frozen in liquid nitrogen and stored at -80°C until RNA extraction.</sample_protocol><sample_protocol>Library Construction - RNA-seq libraries were prepared using NEBNext Ultra RNA Library Prep Kit. mRNA was enriched by poly-A selection. Libraries were quantified by Qubit and size distribution was checked by Bioanalyzer.</sample_protocol><sample_protocol>Nucleic Acid Extraction - Total RNA was extracted using TRIzol reagent according to manufacturer's instructions. RNA quality was checked by agarose gel electrophoresis and quantified using NanoDrop spectrophotometer.</sample_protocol><sample_protocol>Growth Protocol - Vigna radiata var. sublobata plants were grown in experimental field under standard agricultural conditions. Plants were watered regularly and fertilized according to standard cultivation practices.</sample_protocol><figure_sub>Organization</figure_sub><figure_sub>MINSEQE Score</figure_sub><figure_sub>Assays and Data</figure_sub><figure_sub>MAGE-TAB Files</figure_sub><pubmed_authors>Zhi-Wei Wang</pubmed_authors></additional><is_claimable>false</is_claimable><name>RNA-seq analysis of multiple tissues in wild mung bean (Vigna radiata var. sublobata)</name><description>This study presents transcriptome profiles of multiple tissues (root, stem, leaf, flower, and pod) from Vigna radiata var. sublobata, a wild relative of cultivated mung bean. RNA sequencing was performed using Illumina platform to investigate tissue-specific gene expression patterns. The data will facilitate understanding of gene regulation in different plant organs and provide resources for comparative genomics with cultivated Vigna radiata.  Experimental design: Tissues were collected from mature plants grown under controlled conditions. Three biological replicates per tissue type. Libraries were prepared using poly-A selection and sequenced in paired-end mode (2x150 bp).  This submission includes raw sequencing data (FASTQ files) for all samples.</description><dates><release>2026-01-13T00:00:00Z</release><modification>2026-01-13T02:02:23.472Z</modification><creation>2025-12-18T10:12:20.6Z</creation></dates><accession>E-MTAB-16409</accession><cross_references><ENA>ERP186757</ENA><EFO>EFO_0002944</EFO><EFO>EFO_0004170</EFO><EFO>EFO_0003789</EFO><EFO>EFO_0005518</EFO><EFO>EFO_0003738</EFO><EFO>EFO_0004184</EFO></cross_references></HashMap>