<HashMap><database>biostudies-arrayexpress</database><scores/><additional><omics_type>Metabolomics</omics_type><omics_type>Unknown</omics_type><omics_type>Transcriptomics</omics_type><omics_type>Genomics</omics_type><omics_type>Proteomics</omics_type><submitter>Data Submission IFOM - ETS</submitter><instrument_platform>MinION</instrument_platform><study_type>DNA-seq</study_type><organism>Homo sapiens</organism><species>Homo sapiens</species><full_dataset_link>https://www.ebi.ac.uk/biostudies/studies/E-MTAB-16581</full_dataset_link><description>Nanopore sequencing data of rolling-circle amplification (RCA) products performed on hES cells, treated with 2mJ UV-C to induce apoptosis. The experimental conditions were designed to characterize circular DNA forms generated during apoptosis. gDNA from untreated and UV-treated cells are used as controls.</description><repository>biostudies-arrayexpress</repository><sample_protocol>Sample Collection - Cells were collected by treatment with accutase, a gentle enzymatic dissociation reagent for detaching adherent cells.</sample_protocol><sample_protocol>Nucleic Acid Extraction - Total DNA was isolated using phenol-chloroform extraction followed by ethanol precipitation and resuspension in nuclease-free water.</sample_protocol><sample_protocol>Sequencing - Libraries were sequenced on the Oxford Nanopore MinION platform using standard flow cells with real-time basecalling</sample_protocol><sample_protocol>Library Construction - Libraries were prepared using the Oxford Nanopore Native Barcoding Kit for multiplexed long-read sequencing applications.</sample_protocol><figure_sub>Organization</figure_sub><figure_sub>MINSEQE Score</figure_sub><figure_sub>Assays and Data</figure_sub><figure_sub>MAGE-TAB Files</figure_sub><pubmed_authors>Ylli Doksani</pubmed_authors><pubmed_authors>Elia Zanella</pubmed_authors><pubmed_authors>Data Submission IFOM - ETS</pubmed_authors></additional><is_claimable>false</is_claimable><name>Nanopore sequencing data of rolling-circle amplification products from apoptotic cells and its relative gDNA control</name><description>Nanopore sequencing data of rolling-circle amplification (RCA) products performed on hES cells, treated with 2mJ UV-C to induce apoptosis. The experimental conditions were designed to characterize circular DNA forms generated during apoptosis. gDNA from untreated and UV-treated cells are used as controls.</description><dates><release>2026-04-30T00:00:00Z</release><modification>2026-04-30T01:01:53.644Z</modification><creation>2026-01-27T17:25:58.773Z</creation></dates><accession>E-MTAB-16581</accession><cross_references><ENA>ERP188218</ENA><EFO>EFO_0002944</EFO><EFO>EFO_0004170</EFO><EFO>EFO_0002693</EFO><EFO>EFO_0005518</EFO><EFO>EFO_0004184</EFO></cross_references></HashMap>