biostudies-arrayexpressInes HenriquesHomo sapienshttps://www.ebi.ac.uk/biostudies/studies/E-MTAB-17119Processed count table RNA sequencing data of kidney tissue.biostudies-arrayexpressNucleic Acid Extraction - RNA was extracted from thawed kidney tissue using the Qiagen AllPrep DNA/RNA kit according to the manufacturer's protocolSample Collection - Kidney tissue was obtained fresh from nephrectomy specimens, minced, and viably cryopreserved until RNA extractionLibrary Construction - RNA-sequencing (RNA-seq) libraries were generated from 300 ng RNA using the KAPA RNA HyperPrep Kit with RiboErase (Roche)Sequencing - Sequencing was performed on a NovaSeq 6000 system (2x 150 base pairs, Illumina)OrganizationMINSEQE ScoreAssays and DataProcessed DataMAGE-TAB FilesData Transformation - Reads were processed as per the GATK 4.0 best practices workflow for variant calling, and aligned using Star fusion (version 2.7.0f) to GRCh38 and gencode version 29. Subsequent normalization to transcripts per million (TPM) was performed.MetabolomicsUnknownTranscriptomicsGenomicsProteomicsIllumina NovaSeq 6000RNA-seq of coding RNAHomo sapiensCell surface proteomics of patient-derived malignant rhabdoid tumor organoids identifies ROBO1 as potential CAR T cell target for pediatric solid tumorsClaudia JandaJarno DrostInes HenriquesJuliane L. Buhl, Jannet Koelewijn, Charlotte op ’t Hoog, Li Yang, Stijn De Munter, Victoria M. Cruz, Daryl Jun Kai Chin, Baojie Zhang, Marliek van Hoesel, Nienke van Herk, Irene Paassen, Katie Nachataya, Laura Hofman, Ella de Boed, Stefan Nierkens, Patrick Kemmeren, Annelisa M. Cornel, Wei Wu, Bart Vandekerckhove, Jarno Drost, Claudia Y. Janda.falseBulk RNA sequencing of three normal human pediatric kidney tissue samplesProcessed count table RNA sequencing data of kidney tissue.2026-09-11T00:00:00Z2026-09-11T20:15:36.196Z2026-05-26T08:30:03.296ZE-MTAB-17119EGAS00001006866EGAS00001003853EFO_0002944EFO_0004170EFO_0005518EFO_0003816EFO_0003738EFO_0004184