<HashMap><database>biostudies-arrayexpress</database><scores/><additional><submitter>Jianyao Xue</submitter><organism>Mus musculus</organism><full_dataset_link>https://www.ebi.ac.uk/biostudies/studies/E-MTAB-17338</full_dataset_link><description>Acute hemolysis can deplete haptoglobin and hemopexin, leaving toxic free heme insufficiently controlled. Here, the authors show that scavenger receptor BI (SR-BI) mediates hepatic uptake of free heme and is essential for protection against heme-induced injury and death. Here we examined gene expression post hemin injections</description><repository>biostudies-arrayexpress</repository><sample_protocol>Sequencing - (1) Data quality control: filtering reads containing adapter or with low quality; (2) Statistics analysis of data production of quality; (3) Mapping reads to reference genome (STAR); (4) Gene expression quantification (HTseq); (5) Differential expression analysis (DEseq2/edgeR). pair-end reads were 150-base-pair ones, output is 9G. NovaSeq 6000 Illumina platform was used</sample_protocol><sample_protocol>Nucleic Acid Extraction - Total RNA was isolated by using RNeasy mini kit from Qiagen</sample_protocol><sample_protocol>Sample Collection - SR-BIfl/fl and AlbcreSR-BIfl/fl mice were treated with/without hemin at 40 µmol/kg BW, i.p. Twenty-four hours later, a second injection was performed. Thirty-eight hours post the initial injection, RNA was isolated from Kidney, lung and liver using Qiagen RNeasy Mini Kit, and sent to Novogene for RNA sequencing analysis.</sample_protocol><sample_protocol>Library Construction - Total RNA was sent to Novogene for library construction</sample_protocol><figure_sub>Organization</figure_sub><figure_sub>MINSEQE Score</figure_sub><figure_sub>Assays and Data</figure_sub><figure_sub>Processed Data</figure_sub><figure_sub>MAGE-TAB Files</figure_sub><data_protocol>Data Transformation - (1) Data quality control: filtering reads containing adapter or with low quality; (2) Statistics analysis of data production of quality; (3) Mapping reads to reference genome (STAR); (4) Gene expression quantification (HTseq); (5) Differential expression analysis (DEseq2/edgeR). pair-end reads were 150-base-pair ones, output is 9G. NovaSeq 6000 Illumina platform was used Supplementary files format and content: fpkm Supplementary files format and content: readcount</data_protocol><omics_type>Metabolomics</omics_type><omics_type>Unknown</omics_type><omics_type>Transcriptomics</omics_type><omics_type>Genomics</omics_type><omics_type>Proteomics</omics_type><instrument_platform>Illumina NovaSeq 6000</instrument_platform><study_type>RNA-seq of coding RNA</study_type><species>Mus musculus</species><pubmed_authors>Jianyao Xue</pubmed_authors></additional><is_claimable>false</is_claimable><name>Hemin-induced DEGs in Lung, Kidney of WT and hepatic SR-BI KO mice</name><description>Acute hemolysis can deplete haptoglobin and hemopexin, leaving toxic free heme insufficiently controlled. Here, the authors show that scavenger receptor BI (SR-BI) mediates hepatic uptake of free heme and is essential for protection against heme-induced injury and death. Here we examined gene expression post hemin injections</description><dates><release>2026-07-24T00:00:00Z</release><modification>2026-07-24T01:00:52.285Z</modification><creation>2026-07-15T14:23:46.188Z</creation></dates><accession>E-MTAB-17338</accession><cross_references><ENA>ERP201272</ENA><EFO>EFO_0002944</EFO><EFO>EFO_0004170</EFO><EFO>EFO_0005518</EFO><EFO>EFO_0003816</EFO><EFO>EFO_0003738</EFO><EFO>EFO_0004184</EFO></cross_references></HashMap>