<HashMap><database>biostudies-arrayexpress</database><scores/><additional><submitter>Angel Carlos Roman</submitter><organism>Homo sapiens</organism><full_dataset_link>https://www.ebi.ac.uk/biostudies/studies/E-MTAB-17353</full_dataset_link><description>We aim to investigate the role of METTL3 and METTL14, the catalytic enzyme responsible for m⁶A methylation, in high-grade serous ovarian carcinoma (HGSOC) cells like OVCAR8 human cell line. In addition, we aimed to identify m⁶A-modified transcripts using MeRIP-seq in the same cell line.</description><repository>biostudies-arrayexpress</repository><sample_protocol>Nucleic Acid Extraction - RNA was extracted using a standard RNA mini isolation kit.</sample_protocol><sample_protocol>Sample Collection - Cell cultures were maintained at 37ºC / 5% CO2 using standard DMEM media + 10% FBS</sample_protocol><sample_protocol>Sequencing - Illumina sequencing was done in Novogene, extracting 20M paired-end 75 bp reads</sample_protocol><sample_protocol>Library Construction - Libraries were built by Novogene using standard procedures for Illumina sequencing.</sample_protocol><sample_protocol>Nucleic Acid Extraction - MeRIP was used for immunoprecipitation of m6A-enriched of RNA</sample_protocol><figure_sub>Organization</figure_sub><figure_sub>MINSEQE Score</figure_sub><figure_sub>Assays and Data</figure_sub><figure_sub>Processed Data</figure_sub><figure_sub>MAGE-TAB Files</figure_sub><data_protocol>Data Transformation - In the case of RNA-seq, Kallisto was used to pseudoalign and quantify transcript reads. In the case of MeRIP, MACS2 was used to detect peaks in a BWA-aligned data.</data_protocol><omics_type>Metabolomics</omics_type><omics_type>Unknown</omics_type><omics_type>Transcriptomics</omics_type><omics_type>Genomics</omics_type><omics_type>Proteomics</omics_type><instrument_platform>Illumina NovaSeq 6000</instrument_platform><study_type>RNA-seq of coding RNA</study_type><species>Homo sapiens</species><pubmed_authors>Angel Carlos Roman</pubmed_authors></additional><is_claimable>false</is_claimable><name>RNA-seq of human ovarian cancer cell line (OVCAR8) with modulation of METTL3 and METTL14</name><description>We aim to investigate the role of METTL3 and METTL14, the catalytic enzyme responsible for m⁶A methylation, in high-grade serous ovarian carcinoma (HGSOC) cells like OVCAR8 human cell line. In addition, we aimed to identify m⁶A-modified transcripts using MeRIP-seq in the same cell line.</description><dates><release>2026-09-14T00:00:00Z</release><modification>2026-09-14T17:50:28.573Z</modification><creation>2026-08-31T20:07:51.087Z</creation></dates><accession>E-MTAB-17353</accession><cross_references><ENA>ERP204731</ENA><EFO>EFO_0002944</EFO><EFO>EFO_0004170</EFO><EFO>EFO_0005518</EFO><EFO>EFO_0003816</EFO><EFO>EFO_0003738</EFO><EFO>EFO_0004184</EFO></cross_references></HashMap>