<HashMap><database>biostudies-arrayexpress</database><scores/><additional><submitter>Shen Lian</submitter><organism>C57BL/6J</organism><software>SAM 2.2</software><full_dataset_link>https://www.ebi.ac.uk/biostudies/studies/E-MTAB-2587</full_dataset_link><description>To identify novel transcriptional factors involved in dysfunctional hepatic lipids homeostasis in obesity</description><repository>biostudies-arrayexpress</repository><sample_protocol>Sample Treatment - Mice were sacrificed at 16:00 (Zeitgeber Time 8 during light phase).</sample_protocol><sample_protocol>Labeling - Equal aliquots of total RNA from each of four mouse livers in each group were pooled and used for biotin labeling as described in the Affymetrix technical bulletin.</sample_protocol><sample_protocol>Nucleic Acid Extraction - Total RNA was prepared from each liver using TRIzol.</sample_protocol><sample_protocol>Hybridization - The resulting RNA was used to hybridize GeneChips (Affymetrix) according to the manufacturer’s protocols.</sample_protocol><figure_sub>MIAME Score</figure_sub><figure_sub>Organization</figure_sub><figure_sub>Assays and Data</figure_sub><figure_sub>MAGE-TAB Files</figure_sub><figure_sub>Array Designs</figure_sub><data_protocol>Data Transformation - Significance analysis of microarrays (SAM) was used to identify differences between different samples.</data_protocol><omics_type>Metabolomics</omics_type><omics_type>Unknown</omics_type><omics_type>Transcriptomics</omics_type><omics_type>Genomics</omics_type><omics_type>Proteomics</omics_type><study_type>transcription profiling by array</study_type><species>C57BL/6J</species><pubmed_title>Hepatic differentiated embryo-chondrocyte expressed gene 1 (DEC1) inhibits sterol regulatory element-binding protein-1c (SREBP-1c) expression and alleviates fatty liver phenotype</pubmed_title><pubmed_authors>Lian Shen, Anfang Cui, Yuan Xue, Ying Cui, Xueyu Dong, Yong Gao, Hao Yang, Fude Fang, and Yongsheng Chang1</pubmed_authors><pubmed_authors>Yongsheng Chang</pubmed_authors><pubmed_authors>Shen Lian</pubmed_authors></additional><is_claimable>false</is_claimable><name>ob mice vs wild type c57 mRNA</name><description>To identify novel transcriptional factors involved in dysfunctional hepatic lipids homeostasis in obesity</description><dates><release>2014-05-09T00:00:00Z</release><modification>2022-03-14T18:39:07.396Z</modification><creation>2022-03-14T18:39:07.396Z</creation></dates><accession>E-MTAB-2587</accession><cross_references><EFO>EFO_0002768</EFO><EFO>EFO_0002944</EFO><EFO>EFO_0003813</EFO><EFO>EFO_0003816</EFO><EFO>EFO_0003969</EFO><EFO>EFO_0003815</EFO></cross_references></HashMap>