<HashMap><database>biostudies-arrayexpress</database><scores/><additional><omics_type>Metabolomics</omics_type><omics_type>Unknown</omics_type><omics_type>Transcriptomics</omics_type><omics_type>Genomics</omics_type><omics_type>Proteomics</omics_type><submitter>Stefano Biffo</submitter><instrument_platform>Illumina HiSeq 2500</instrument_platform><study_type>RNA-seq of coding RNA</study_type><organism>Homo sapiens</organism><species>Homo sapiens</species><full_dataset_link>https://www.ebi.ac.uk/biostudies/studies/E-MTAB-8496</full_dataset_link><description>Total RNAs were isolated from Delta47 human myeloma cells expressing either the FNDC3A protein or a Mock control and sequenced. The Delta47 cell line lacks FNDC3A expression, so the purpose of the experiment was to quantify the differentially-abundant mRNAs in the two cell lines.</description><repository>biostudies-arrayexpress</repository><sample_protocol>Nucleic Acid Extraction - Total RNA from control delta47 cells and delta47 cells expressing FNDC3A were isolated using the RNeasy kit (Qiagen)</sample_protocol><sample_protocol>Sample Collection - Delta47 cell lines were grown in RPMI 1640 medium containing 100 U/ml penicillin and 100 microg/ml streptomycin supplemented with 20% FBS and 1% glutamine.</sample_protocol><sample_protocol>Library Construction - Random primed cDNA libraries were constructed from 100 ng of total RNA.</sample_protocol><sample_protocol>Sequencing - A paired-end (2×125) run was performed with 50 million reads per sample.</sample_protocol><figure_sub>Organization</figure_sub><figure_sub>MINSEQE Score</figure_sub><figure_sub>Assays and Data</figure_sub><figure_sub>MAGE-TAB Files</figure_sub><pubmed_authors>Stefano Biffo</pubmed_authors><pubmed_authors>Nicola Manfrini</pubmed_authors><pubmed_authors>Riccardo Rossi</pubmed_authors></additional><is_claimable>false</is_claimable><name>RNA-seq of Delta47 human myeloma cells expressing either the FNDC3A protein or a Mock control</name><description>Total RNAs were isolated from Delta47 human myeloma cells expressing either the FNDC3A protein or a Mock control and sequenced. The Delta47 cell line lacks FNDC3A expression, so the purpose of the experiment was to quantify the differentially-abundant mRNAs in the two cell lines.</description><dates><release>2020-10-22T00:00:00Z</release><modification>2022-02-04T05:39:23.123Z</modification><creation>2022-02-04T05:39:23.123Z</creation></dates><accession>E-MTAB-8496</accession><cross_references><ENA>ERP118228</ENA><EFO>EFO_0002944</EFO><EFO>EFO_0004170</EFO><EFO>EFO_0005518</EFO><EFO>EFO_0003738</EFO><EFO>EFO_0004184</EFO></cross_references></HashMap>