<HashMap><database>biostudies-arrayexpress</database><scores/><additional><omics_type>Metabolomics</omics_type><omics_type>Unknown</omics_type><omics_type>Transcriptomics</omics_type><omics_type>Genomics</omics_type><omics_type>Proteomics</omics_type><submitter>Amit Dutt</submitter><instrument_platform>BGISEQ-500</instrument_platform><study_type>DNA-seq</study_type><organism>Homo sapiens</organism><species>Homo sapiens</species><full_dataset_link>https://www.ebi.ac.uk/biostudies/studies/E-MTAB-9289</full_dataset_link><description>The whole-genome sequencing raw data comprises of 3 paired samples of cervical adenocarcinoma subtype.</description><repository>biostudies-arrayexpress</repository><sample_protocol>Nucleic Acid Extraction - DNA was extracted from tumor tissue and blood normals using qiagen tissue and blood extraction kit</sample_protocol><sample_protocol>Library Construction - the genomic DNA was fragmented by Covaris and fragments of 350bp were selected and A tailing was performed. Adapters were then added to the ends of DNA and amplified using ligation mediated PCR approach which was further subjected to single end separation and cyclization. DNA Nanoballs were produced by rolling circle amplification</sample_protocol><sample_protocol>Sequencing - DNA nanoballs were loaded on patterned nanoarrays on the BGISEQ-500 sequencing platform and paired end sequencing was performed.</sample_protocol><sample_protocol>Sample Collection - 3 tumor samples and paired normal samples of cervical adenocarcinoma were collected at ACTREC-TMC</sample_protocol><figure_sub>Organization</figure_sub><figure_sub>MINSEQE Score</figure_sub><figure_sub>Assays and Data</figure_sub><figure_sub>MAGE-TAB Files</figure_sub><pubmed_authors>Amit Dutt</pubmed_authors></additional><is_claimable>false</is_claimable><name>Whole Genome Sequencing of Cervical Adenocarcinoma</name><description>The whole-genome sequencing raw data comprises of 3 paired samples of cervical adenocarcinoma subtype.</description><dates><release>2025-11-09T00:00:00Z</release><modification>2025-11-09T02:01:46.18Z</modification><creation>2022-03-04T14:58:09.503Z</creation></dates><accession>E-MTAB-9289</accession><cross_references><ENA>ERP122681</ENA><EFO>EFO_0002944</EFO><EFO>EFO_0004170</EFO><EFO>EFO_0002693</EFO><EFO>EFO_0005518</EFO><EFO>EFO_0004184</EFO></cross_references></HashMap>