{"database":"biostudies-literature","file_versions":[],"scores":null,"additional":{"submitter":["Tian Y"],"funding":["Key Laboratory of Grain Crop Genetic Resources Evaluation and Utilization","the National Natural Science Foundation of China","the Agricultural Science and Technology Innovation Program (ASTIP) of Chinese Academy of Agricultural Sciences"],"pagination":["50"],"full_dataset_link":["https://www.ebi.ac.uk/biostudies/studies/S-EPMC10011322"],"repository":["biostudies-literature"],"omics_type":["Unknown"],"volume":["136(3)"],"pubmed_abstract":["<h4>Key message</h4>IBD analysis clarified the dynamics of chromosomal recombination during the ZP pedigree breeding process and identified ten genomic regions resistant to SCN race3 combining association mapping. Soybean cyst nematode (SCN, Heterodera glycines Ichinohe) is one of the most devastating pathogens for soybean production worldwide. The cultivar Zhongpin03-5373 (ZP), derived from SCN-resistant progenitor parents, Peking, PI 437654 and Huipizhi Heidou, is an elite line with high resistance to SCN race3. In the current study, a pedigree variation map was generated for ZP and its ten progenitors using 3,025,264 high-quality SNPs identified from an average of 16.2 × re-sequencing for each genome. Through identity by decent (IBD) tracking, we showed the dynamic change of genome and "],"journal":["TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik"],"pubmed_title":["Deciphering the genetic basis of resistance to soybean cyst nematode combining IBD and association mapping."],"pmcid":["PMC10011322"],"funding_grant_id":["32172002","CAAS-ZDRW202109"],"pubmed_authors":["Luan X","Li H","Yu L","Li D","Zhang H","Reif JC","Wang J","Li YH","Liu X","Qiu LJ","Tian Y","Wang X","Guo C"],"additional_accession":[]},"is_claimable":false,"name":"Deciphering the genetic basis of resistance to soybean cyst nematode combining IBD and association mapping.","description":"<h4>Key message</h4>IBD analysis clarified the dynamics of chromosomal recombination during the ZP pedigree breeding process and identified ten genomic regions resistant to SCN race3 combining association mapping. Soybean cyst nematode (SCN, Heterodera glycines Ichinohe) is one of the most devastating pathogens for soybean production worldwide. The cultivar Zhongpin03-5373 (ZP), derived from SCN-resistant progenitor parents, Peking, PI 437654 and Huipizhi Heidou, is an elite line with high resistance to SCN race3. In the current study, a pedigree variation map was generated for ZP and its ten progenitors using 3,025,264 high-quality SNPs identified from an average of 16.2 × re-sequencing for each genome. Through identity by decent (IBD) tracking, we showed the dynamic change of genome and ","dates":{"release":"2023-01-01T00:00:00Z","publication":"2023 Mar","modification":"2025-05-29T19:45:18.519Z","creation":"2025-04-07T11:11:27.073Z"},"accession":"S-EPMC10011322","cross_references":{"pubmed":["36912956"],"doi":["10.1007/s00122-023-04268-3"]}}