<HashMap><database>biostudies-literature</database><scores/><additional><submitter>Loh JW</submitter><funding>MOH | National Medical Research Council</funding><funding>MOH | National Medical Research Council (NMRC)</funding><pagination>461</pagination><full_dataset_link>https://www.ebi.ac.uk/biostudies/studies/S-EPMC10140281</full_dataset_link><repository>biostudies-literature</repository><omics_type>Unknown</omics_type><volume>6(1)</volume><pubmed_abstract>Angiosarcomas are rare malignant tumors of the endothelium, arising commonly from the head and neck region (AS-HN) and recently associated with ultraviolet (UV) exposure and human herpesvirus-7 infection. We examined 81 cases of angiosarcomas, including 47 cases of AS-HN, integrating information from whole genome sequencing, gene expression profiling and spatial transcriptomics (10X Visium). In the AS-HN cohort, we observed recurrent somatic mutations in CSMD3 (18%), LRP1B (18%), MUC16 (18%), POT1 (16%) and TP53 (16%). UV-positive AS-HN harbored significantly higher tumor mutation burden than UV-negative cases (p = 0.0294). NanoString profiling identified three clusters with distinct tumor inflammation signature scores (p &lt; 0.001). Spatial transcriptomics revealed topological profiles of t</pubmed_abstract><journal>Communications biology</journal><pubmed_title>Spatial transcriptomics reveal topological immune landscapes of Asian head and neck angiosarcoma.</pubmed_title><pmcid>PMC10140281</pmcid><funding_grant_id>NMRC/STAR/0006/2009</funding_grant_id><funding_grant_id>TA21jun-0005</funding_grant_id><funding_grant_id>CG21APR200</funding_grant_id><funding_grant_id>SEEDFD21jun-0002</funding_grant_id><pubmed_authors>Kannan B</pubmed_authors><pubmed_authors>Ko TK</pubmed_authors><pubmed_authors>Gu NX</pubmed_authors><pubmed_authors>Ong CK</pubmed_authors><pubmed_authors>Lee JY</pubmed_authors><pubmed_authors>Guan P</pubmed_authors><pubmed_authors>Lim BY</pubmed_authors><pubmed_authors>Teh BT</pubmed_authors><pubmed_authors>Loh JW</pubmed_authors><pubmed_authors>Yeong J</pubmed_authors><pubmed_authors>Lee ECY</pubmed_authors><pubmed_authors>Ng CC</pubmed_authors><pubmed_authors>Lim JCT</pubmed_authors><pubmed_authors>Lim JQ</pubmed_authors><pubmed_authors>Lim AH</pubmed_authors><pubmed_authors>Chan JY</pubmed_authors></additional><is_claimable>false</is_claimable><name>Spatial transcriptomics reveal topological immune landscapes of Asian head and neck angiosarcoma.</name><description>Angiosarcomas are rare malignant tumors of the endothelium, arising commonly from the head and neck region (AS-HN) and recently associated with ultraviolet (UV) exposure and human herpesvirus-7 infection. We examined 81 cases of angiosarcomas, including 47 cases of AS-HN, integrating information from whole genome sequencing, gene expression profiling and spatial transcriptomics (10X Visium). In the AS-HN cohort, we observed recurrent somatic mutations in CSMD3 (18%), LRP1B (18%), MUC16 (18%), POT1 (16%) and TP53 (16%). UV-positive AS-HN harbored significantly higher tumor mutation burden than UV-negative cases (p = 0.0294). NanoString profiling identified three clusters with distinct tumor inflammation signature scores (p &lt; 0.001). Spatial transcriptomics revealed topological profiles of t</description><dates><release>2023-01-01T00:00:00Z</release><publication>2023 Apr</publication><modification>2025-04-26T01:28:42.045Z</modification><creation>2025-04-06T10:04:49.339Z</creation></dates><accession>S-EPMC10140281</accession><cross_references><pubmed>37106027</pubmed><doi>10.1038/s42003-023-04856-5</doi></cross_references></HashMap>