{"database":"biostudies-literature","file_versions":[],"scores":null,"additional":{"omics_type":["Unknown"],"volume":["9(5)"],"submitter":["Adisakwattana P"],"funding":["Mahidol University"],"pubmed_abstract":["The Malayan pit viper (<i>Calloselasma rhodostoma</i>) is a hemotoxic snake widely found in Southeast Asia and is responsible for the majority of poisoning cases in this region, including Thailand. However, a comprehensive knowledge of the venom protein profile and classification, as well as novel venom proteins, of this viper is still limited. Recently, the detailed composition of several snake venoms has been discovered through the use of transcriptome analysis. Therefore, the aim of this study was to employ a next-generation sequencing platform and bioinformatics analysis to undertake venom-gland <i>de novo</i> transcriptomics of Malayan pit vipers. Furthermore, 21,272 functional coding genes were identified from 36,577 transcripts, of which 314 transcripts were identified as toxin prot"],"journal":["Heliyon"],"pagination":["e15476"],"full_dataset_link":["https://www.ebi.ac.uk/biostudies/studies/S-EPMC10160700"],"repository":["biostudies-literature"],"pubmed_title":["Venom-gland transcriptomics of the Malayan pit viper (<i>Calloselasma rhodostoma</i>) for identification, classification, and characterization of venom proteins."],"pmcid":["PMC10160700"],"pubmed_authors":["Thawornkuno C","Chanhome L","Phuphisut O","Adisakwattana P","Chaiyabutr N","Onrapak R"],"additional_accession":[]},"is_claimable":false,"name":"Venom-gland transcriptomics of the Malayan pit viper (<i>Calloselasma rhodostoma</i>) for identification, classification, and characterization of venom proteins.","description":"The Malayan pit viper (<i>Calloselasma rhodostoma</i>) is a hemotoxic snake widely found in Southeast Asia and is responsible for the majority of poisoning cases in this region, including Thailand. However, a comprehensive knowledge of the venom protein profile and classification, as well as novel venom proteins, of this viper is still limited. Recently, the detailed composition of several snake venoms has been discovered through the use of transcriptome analysis. Therefore, the aim of this study was to employ a next-generation sequencing platform and bioinformatics analysis to undertake venom-gland <i>de novo</i> transcriptomics of Malayan pit vipers. Furthermore, 21,272 functional coding genes were identified from 36,577 transcripts, of which 314 transcripts were identified as toxin prot","dates":{"release":"2023-01-01T00:00:00Z","publication":"2023 May","modification":"2026-06-23T03:23:37.282Z","creation":"2025-02-19T04:29:05.12Z"},"accession":"S-EPMC10160700","cross_references":{"pubmed":["37153433"],"doi":["10.1016/j.heliyon.2023.e15476"]}}