<HashMap><database>biostudies-literature</database><scores/><additional><omics_type>Unknown</omics_type><volume>16(9)</volume><submitter>Yoosefian M</submitter><funding>Graduate University of Advanced Technology</funding><pubmed_abstract>In recent years, more than 200 countries of the world have faced a health crisis due to the epidemiological disease of COVID-19 caused by the SARS-CoV-2 virus. It had a huge impact on the world economy and the global health sector. Researchers are studying the design and discovery of drugs that can inhibit SARS-CoV-2. The main protease of SARS-CoV-2 is an attractive target for the study of antiviral drugs against coronavirus diseases. According to the docking results, binding energy for boceprevir, masitinib and rupintrivir with CMP are -10.80, -9.39, and -9.51 kcal/mol respectively. Also, for all investigated systems, van der Waals and electrostatic interactions are quite favorable for binding the drugs to SARS-CoV-2 coronavirus main protease, indicating confirmation of the complex stability.</pubmed_abstract><journal>Arabian journal of chemistry</journal><pagination>105051</pagination><full_dataset_link>https://www.ebi.ac.uk/biostudies/studies/S-EPMC10246938</full_dataset_link><repository>biostudies-literature</repository><pubmed_title>A suitable drug structure for interaction with SARS-CoV-2 main protease between boceprevir, masitinib and rupintrivir; a molecular dynamics study.</pubmed_title><pmcid>PMC10246938</pmcid><pubmed_authors>Dashti R</pubmed_authors><pubmed_authors>Mir A</pubmed_authors><pubmed_authors>Mahani M</pubmed_authors><pubmed_authors>Yoosefian M</pubmed_authors><pubmed_authors>Montazer L</pubmed_authors></additional><is_claimable>false</is_claimable><name>A suitable drug structure for interaction with SARS-CoV-2 main protease between boceprevir, masitinib and rupintrivir; a molecular dynamics study.</name><description>In recent years, more than 200 countries of the world have faced a health crisis due to the epidemiological disease of COVID-19 caused by the SARS-CoV-2 virus. It had a huge impact on the world economy and the global health sector. Researchers are studying the design and discovery of drugs that can inhibit SARS-CoV-2. The main protease of SARS-CoV-2 is an attractive target for the study of antiviral drugs against coronavirus diseases. According to the docking results, binding energy for boceprevir, masitinib and rupintrivir with CMP are -10.80, -9.39, and -9.51 kcal/mol respectively. Also, for all investigated systems, van der Waals and electrostatic interactions are quite favorable for binding the drugs to SARS-CoV-2 coronavirus main protease, indicating confirmation of the complex stability.</description><dates><release>2023-01-01T00:00:00Z</release><publication>2023 Sep</publication><modification>2025-04-21T23:46:39.858Z</modification><creation>2025-04-05T19:12:56.147Z</creation></dates><accession>S-EPMC10246938</accession><cross_references><pubmed>37323221</pubmed><doi>10.1016/j.arabjc.2023.105051</doi></cross_references></HashMap>