<HashMap><database>biostudies-literature</database><scores/><additional><omics_type>Unknown</omics_type><submitter>Bell AJ</submitter><funding>NIAID NIH HHS</funding><funding>NHLBI NIH HHS</funding><funding>CLC NIH HHS</funding><pubmed_abstract>&lt;h4>Objectives&lt;/h4>Small airways disease (SAD) is a major cause of airflow obstruction in COPD patients, and has been identified as a precursor to emphysema. Although the amount of SAD in the lungs can be quantified using our Parametric Response Mapping (PRM) approach, the full breadth of this readout as a measure of emphysema and COPD progression has yet to be explored. We evaluated topological features of PRM-derived normal parenchyma and SAD as surrogates of emphysema and predictors of spirometric decline.&lt;h4>Materials and methods&lt;/h4>PRM metrics of normal lung (PRM&lt;sup>Norm&lt;/sup>) and functional SAD (PRM&lt;sup>fSAD&lt;/sup>) were generated from CT scans collected as part of the COPDGene study (n=8956). Volume density (V) and Euler-Poincaré Characteristic (χ) image maps, measures of the extent and coalescence of pocket formations (i.e., topologies), respectively, were determined for both PRM&lt;sup>Norm&lt;/sup> and PRM&lt;sup>fSAD&lt;/sup>. Association with COPD severity, emphysema, and spirometric measures were assessed via multivariable regression models. Readouts were evaluated as inputs for predicting FEV&lt;sub>1&lt;/sub> decline using a machine learning model.&lt;h4>Results&lt;/h4>Multivariable cross-sectional analysis of COPD subjects showed that V and χ measures for PRM&lt;sup>fSAD&lt;/sup> and PRM&lt;sup>Norm&lt;/sup> were independently associated with the amount of emphysema. Readouts χ&lt;sup>fSAD&lt;/sup> (β of 0.106, p&lt;0.001) and V&lt;sup>fSAD&lt;/sup> (β of 0.065, p=0.004) were also independently associated with FEV&lt;sub>1&lt;/sub>% predicted. The machine learning model using PRM topologies as inputs predicted FEV&lt;sub>1&lt;/sub> decline over five years with an AUC of 0.69.&lt;h4>Conclusions&lt;/h4>We demonstrated that V and χ of fSAD and Norm have independent value when associated with lung function and emphysema. In addition, we demonstrated that these readouts are predictive of spirometric decline when used as inputs in a ML model. Our topological PRM approach using PRM&lt;sup>fSAD&lt;/sup> and PRM&lt;sup>Norm&lt;/sup> may show promise as an early indicator of emphysema onset and COPD progression.</pubmed_abstract><journal>medRxiv : the preprint server for health sciences</journal><pagination>2023.05.26.23290532</pagination><full_dataset_link>https://www.ebi.ac.uk/biostudies/studies/S-EPMC10274970</full_dataset_link><repository>biostudies-literature</repository><pubmed_title>Quantitative CT of Normal Lung Parenchyma and Small Airways Disease Topologies are Associated With COPD Severity and Progression.</pubmed_title><pmcid>PMC10274970</pmcid><funding_grant_id>T32 HL007749</funding_grant_id><funding_grant_id>75N92021D00011</funding_grant_id><funding_grant_id>U01 HL089897</funding_grant_id><funding_grant_id>R01 HL150023</funding_grant_id><funding_grant_id>75N93023D00011</funding_grant_id><funding_grant_id>U01 HL089856</funding_grant_id><funding_grant_id>R01 HL139690</funding_grant_id><funding_grant_id>75N90023D00011</funding_grant_id><pubmed_authors>Ram S</pubmed_authors><pubmed_authors>Wang JM</pubmed_authors><pubmed_authors>Murray S</pubmed_authors><pubmed_authors>Kazerooni EA</pubmed_authors><pubmed_authors>Hatt CR</pubmed_authors><pubmed_authors>Hoff BA</pubmed_authors><pubmed_authors>Han MK</pubmed_authors><pubmed_authors>Labaki WW</pubmed_authors><pubmed_authors>Lynch DA</pubmed_authors><pubmed_authors>Pal R</pubmed_authors><pubmed_authors>Galban CJ</pubmed_authors><pubmed_authors>Bell AJ</pubmed_authors><pubmed_authors>Galban S</pubmed_authors><pubmed_authors>Humphries SM</pubmed_authors><pubmed_authors>Martinez FJ</pubmed_authors></additional><is_claimable>false</is_claimable><name>Quantitative CT of Normal Lung Parenchyma and Small Airways Disease Topologies are Associated With COPD Severity and Progression.</name><description>&lt;h4>Objectives&lt;/h4>Small airways disease (SAD) is a major cause of airflow obstruction in COPD patients, and has been identified as a precursor to emphysema. Although the amount of SAD in the lungs can be quantified using our Parametric Response Mapping (PRM) approach, the full breadth of this readout as a measure of emphysema and COPD progression has yet to be explored. We evaluated topological features of PRM-derived normal parenchyma and SAD as surrogates of emphysema and predictors of spirometric decline.&lt;h4>Materials and methods&lt;/h4>PRM metrics of normal lung (PRM&lt;sup>Norm&lt;/sup>) and functional SAD (PRM&lt;sup>fSAD&lt;/sup>) were generated from CT scans collected as part of the COPDGene study (n=8956). Volume density (V) and Euler-Poincaré Characteristic (χ) image maps, measures of the extent and coalescence of pocket formations (i.e., topologies), respectively, were determined for both PRM&lt;sup>Norm&lt;/sup> and PRM&lt;sup>fSAD&lt;/sup>. Association with COPD severity, emphysema, and spirometric measures were assessed via multivariable regression models. Readouts were evaluated as inputs for predicting FEV&lt;sub>1&lt;/sub> decline using a machine learning model.&lt;h4>Results&lt;/h4>Multivariable cross-sectional analysis of COPD subjects showed that V and χ measures for PRM&lt;sup>fSAD&lt;/sup> and PRM&lt;sup>Norm&lt;/sup> were independently associated with the amount of emphysema. Readouts χ&lt;sup>fSAD&lt;/sup> (β of 0.106, p&lt;0.001) and V&lt;sup>fSAD&lt;/sup> (β of 0.065, p=0.004) were also independently associated with FEV&lt;sub>1&lt;/sub>% predicted. The machine learning model using PRM topologies as inputs predicted FEV&lt;sub>1&lt;/sub> decline over five years with an AUC of 0.69.&lt;h4>Conclusions&lt;/h4>We demonstrated that V and χ of fSAD and Norm have independent value when associated with lung function and emphysema. In addition, we demonstrated that these readouts are predictive of spirometric decline when used as inputs in a ML model. Our topological PRM approach using PRM&lt;sup>fSAD&lt;/sup> and PRM&lt;sup>Norm&lt;/sup> may show promise as an early indicator of emphysema onset and COPD progression.</description><dates><release>2023-01-01T00:00:00Z</release><publication>2023 Nov</publication><modification>2024-11-15T03:04:38.616Z</modification><creation>2024-11-15T03:04:38.616Z</creation></dates><accession>S-EPMC10274970</accession><cross_references><pubmed>37333382</pubmed><doi>10.1101/2023.05.26.23290532</doi></cross_references></HashMap>