<HashMap><database>biostudies-literature</database><scores/><additional><omics_type>Unknown</omics_type><submitter>Hasan A</submitter><funding>NCI NIH HHS</funding><funding>NIGMS NIH HHS</funding><pubmed_abstract>The thymus is the site of T lymphocyte development and T cell education to recognize foreign, but not self, antigens. B cells also reside and develop in the thymus, although their functions are less clear. During 'thymic involution,' a process of lymphoid atrophy and adipose replacement linked to sexual maturation, thymocytes decline. However, thymic B cells decrease far less than T cells, such that B cells comprise ~1% of human neonatal thymocytes, but up to ~10% in adults. All jawed vertebrates possess a thymus, and we and others have shown zebrafish (&lt;i>Danio rerio&lt;/i>) also have thymic B cells. Here, we investigated the precise identities of zebrafish thymic T and B cells and how they change with involution. We assessed the timing and specific details of zebrafish thymic involution using multiple lymphocyte-specific, fluorophore-labeled transgenic lines, quantifying the changes in thymic T- and B-lymphocytes pre- vs. post-involution. Our results prove that, as in humans, zebrafish thymic B cells increase relative to T cells post-involution. We also performed RNA sequencing (RNA-seq) on &lt;i>D. rerio&lt;/i> thymic and marrow lymphocytes of four novel double-transgenic lines, identifying distinct populations of immature T and B cells. Collectively, this is the first comprehensive analysis of zebrafish thymic involution, demonstrating its similarity to human involution, and establishing the highly genetically-manipulatable zebrafish model as a template for involution studies.</pubmed_abstract><journal>bioRxiv : the preprint server for biology</journal><pagination>2023.07.25.550519</pagination><full_dataset_link>https://www.ebi.ac.uk/biostudies/studies/S-EPMC10402004</full_dataset_link><repository>biostudies-literature</repository><pubmed_title>Dynamic Changes in Lymphocyte Populations Establish Zebrafish as a Thymic Involution Model.</pubmed_title><pmcid>PMC10402004</pmcid><funding_grant_id>P30 CA225520</funding_grant_id><funding_grant_id>P20 GM103639</funding_grant_id><pubmed_authors>Hasan A</pubmed_authors><pubmed_authors>Park G</pubmed_authors><pubmed_authors>Frazer JK</pubmed_authors><pubmed_authors>Wood B</pubmed_authors><pubmed_authors>Malone-Perez M</pubmed_authors><pubmed_authors>Macias JJ</pubmed_authors><pubmed_authors>Foster CA</pubmed_authors></additional><is_claimable>false</is_claimable><name>Dynamic Changes in Lymphocyte Populations Establish Zebrafish as a Thymic Involution Model.</name><description>The thymus is the site of T lymphocyte development and T cell education to recognize foreign, but not self, antigens. B cells also reside and develop in the thymus, although their functions are less clear. During 'thymic involution,' a process of lymphoid atrophy and adipose replacement linked to sexual maturation, thymocytes decline. However, thymic B cells decrease far less than T cells, such that B cells comprise ~1% of human neonatal thymocytes, but up to ~10% in adults. All jawed vertebrates possess a thymus, and we and others have shown zebrafish (&lt;i>Danio rerio&lt;/i>) also have thymic B cells. Here, we investigated the precise identities of zebrafish thymic T and B cells and how they change with involution. We assessed the timing and specific details of zebrafish thymic involution using multiple lymphocyte-specific, fluorophore-labeled transgenic lines, quantifying the changes in thymic T- and B-lymphocytes pre- vs. post-involution. Our results prove that, as in humans, zebrafish thymic B cells increase relative to T cells post-involution. We also performed RNA sequencing (RNA-seq) on &lt;i>D. rerio&lt;/i> thymic and marrow lymphocytes of four novel double-transgenic lines, identifying distinct populations of immature T and B cells. Collectively, this is the first comprehensive analysis of zebrafish thymic involution, demonstrating its similarity to human involution, and establishing the highly genetically-manipulatable zebrafish model as a template for involution studies.</description><dates><release>2023-01-01T00:00:00Z</release><publication>2023 Jul</publication><modification>2026-04-08T13:35:35.973Z</modification><creation>2026-04-08T03:13:36.239Z</creation></dates><accession>S-EPMC10402004</accession><cross_references><pubmed>37546788</pubmed><doi>10.1101/2023.07.25.550519</doi></cross_references></HashMap>