<HashMap><database>biostudies-literature</database><scores/><additional><submitter>Oliveira RHM</submitter><funding>NHLBI NIH HHS</funding><funding>NCI NIH HHS</funding><funding>National Institutes of Health</funding><pagination>1351753</pagination><full_dataset_link>https://www.ebi.ac.uk/biostudies/studies/S-EPMC10917925</full_dataset_link><repository>biostudies-literature</repository><omics_type>Unknown</omics_type><volume>15</volume><pubmed_abstract>&lt;b>Introduction:&lt;/b> Several signaling pathways are activated during hypoxia to promote angiogenesis, leading to endothelial cell patterning, interaction, and downstream signaling. Understanding the mechanistic signaling differences between endothelial cells under normoxia and hypoxia and their response to different stimuli can guide therapies to modulate angiogenesis. We present a novel mechanistic model of interacting endothelial cells, including the main pathways involved in angiogenesis. &lt;b>Methods:&lt;/b> We calibrate and fit the model parameters based on well-established modeling techniques that include structural and practical parameter identifiability, uncertainty quantification, and global sensitivity. &lt;b>Results:&lt;/b> Our results indicate that the main pathways involved in patterning</pubmed_abstract><journal>Frontiers in physiology</journal><pubmed_title>Endothelial cells signaling and patterning under hypoxia: a mechanistic integrative computational model including the Notch-Dll4 pathway.</pubmed_title><pmcid>PMC10917925</pmcid><funding_grant_id>R01HL101200 R01CA138264 R01HL-141325</funding_grant_id><funding_grant_id>R01 CA138264</funding_grant_id><funding_grant_id>R01 HL141325</funding_grant_id><funding_grant_id>R01 HL101200</funding_grant_id><pubmed_authors>Annex BH</pubmed_authors><pubmed_authors>Oliveira RHM</pubmed_authors><pubmed_authors>Popel AS</pubmed_authors></additional><is_claimable>false</is_claimable><name>Endothelial cells signaling and patterning under hypoxia: a mechanistic integrative computational model including the Notch-Dll4 pathway.</name><description>&lt;b>Introduction:&lt;/b> Several signaling pathways are activated during hypoxia to promote angiogenesis, leading to endothelial cell patterning, interaction, and downstream signaling. Understanding the mechanistic signaling differences between endothelial cells under normoxia and hypoxia and their response to different stimuli can guide therapies to modulate angiogenesis. We present a novel mechanistic model of interacting endothelial cells, including the main pathways involved in angiogenesis. &lt;b>Methods:&lt;/b> We calibrate and fit the model parameters based on well-established modeling techniques that include structural and practical parameter identifiability, uncertainty quantification, and global sensitivity. &lt;b>Results:&lt;/b> Our results indicate that the main pathways involved in patterning</description><dates><release>2024-01-01T00:00:00Z</release><publication>2024</publication><modification>2025-04-18T15:27:05.602Z</modification><creation>2025-04-07T02:07:12.175Z</creation></dates><accession>S-EPMC10917925</accession><cross_references><pubmed>38455844</pubmed><doi>10.3389/fphys.2024.1351753</doi></cross_references></HashMap>