{"database":"biostudies-literature","file_versions":[],"scores":null,"additional":{"submitter":["Zhang K"],"funding":["“Double-chain” project on livestock breeding","\"Double-chain\" project on livestock breeding","Young Talent Fund of Association for Science and Technology in Shaanxi, China","National Key Research and Development Program of China","Agriculture Research System of China","Science and Technology Plan Projects of Tibet Autonomous Region"],"pagination":["104"],"full_dataset_link":["https://www.ebi.ac.uk/biostudies/studies/S-EPMC11155115"],"repository":["biostudies-literature"],"omics_type":["Unknown"],"volume":["12(1)"],"pubmed_abstract":["Background
Ruminant gut microbiota are critical in ecological adaptation, evolution, and nutrition utilization because it regulates energy metabolism, promotes nutrient absorption, and improves immune function. To study the functional roles of key gut microbiota in sheep and goats, it is essential to construct reference microbial gene catalogs and high-quality microbial genomes database.Results
A total of 320 fecal samples were collected from 21 different sheep and goat breeds, originating from 32 distinct farms. Metagenomic deep sequencing and binning assembly were utilized to construct a comprehensive microbial genome information database for the gut microbiota. We successfully generated the largest reference gene catalogs for gut microbiota in sheep and goats, containing"],"journal":["Microbiome"],"pubmed_title":["Compendium of 5810 genomes of sheep and goat gut microbiomes provides new insights into the glycan and mucin utilization."],"pmcid":["PMC11155115"],"funding_grant_id":["CARS-39","2022GD-TSLD-46","2022YFD1300203","XZ202101ZD0001N","2023-6-2-1"],"pubmed_authors":["He C","Zhang K","Cuoji A","Wang L","Kalds P","Wang M","Suo L","Guo M","Gan S","Zhang T","Yang Y","Guo J","Lei Y","Brugger D","Zhao F","Chen Y","Qian Q","Wang X","Mao Y","Wu Y","Xu Y","Liu G"],"additional_accession":[]},"is_claimable":false,"name":"Compendium of 5810 genomes of sheep and goat gut microbiomes provides new insights into the glycan and mucin utilization.","description":"Background
Ruminant gut microbiota are critical in ecological adaptation, evolution, and nutrition utilization because it regulates energy metabolism, promotes nutrient absorption, and improves immune function. To study the functional roles of key gut microbiota in sheep and goats, it is essential to construct reference microbial gene catalogs and high-quality microbial genomes database.Results
A total of 320 fecal samples were collected from 21 different sheep and goat breeds, originating from 32 distinct farms. Metagenomic deep sequencing and binning assembly were utilized to construct a comprehensive microbial genome information database for the gut microbiota. We successfully generated the largest reference gene catalogs for gut microbiota in sheep and goats, containing","dates":{"release":"2024-01-01T00:00:00Z","publication":"2024 Jun","modification":"2026-06-02T01:46:39.023Z","creation":"2026-05-25T03:07:04.373Z"},"accession":"S-EPMC11155115","cross_references":{"pubmed":["38845047"],"doi":["10.1186/s40168-024-01806-z"]}}