<HashMap><database>biostudies-literature</database><scores/><additional><submitter>Shikina S</submitter><funding>MEXT | Japan Society for the Promotion of Science</funding><funding>MEXT | Japan Society for the Promotion of Science (JSPS)</funding><pagination>899</pagination><full_dataset_link>https://www.ebi.ac.uk/biostudies/studies/S-EPMC11269664</full_dataset_link><repository>biostudies-literature</repository><omics_type>Unknown</omics_type><volume>7(1)</volume><pubmed_abstract>Coral polyps are composed of four tissues; however, their characteristics are largely unexplored. Here we report biological characteristics of tentacles (Te), mesenterial filaments (Me), body wall (Bo), and mouth with pharynx (MP), using comparative genomic, morpho-histological, and transcriptomic analyses of the large-polyp coral, Fimbriaphyllia ancora. A draft F. ancora genome assembly of 434 Mbp was created. Morpho-histological and transcriptomic characterization of the four tissues showed that they have distinct differences in structure, primary cellular composition, and transcriptional profiles. Tissue-specific, highly expressed genes (HEGs) of Te are related to biological defense, predation, and coral-algal symbiosis. Me expresses multiple digestive enzymes, whereas Bo expresses inna</pubmed_abstract><journal>Communications biology</journal><pubmed_title>Genome and tissue-specific transcriptomes of the large-polyp coral, Fimbriaphyllia (Euphyllia) ancora: a recipe for a coral polyp.</pubmed_title><pmcid>PMC11269664</pmcid><funding_grant_id>20H03235, 20K21860, and 24K01847</funding_grant_id><funding_grant_id>20J21301</funding_grant_id><pubmed_authors>Chu YL</pubmed_authors><pubmed_authors>Kawamitsu M</pubmed_authors><pubmed_authors>Fujie M</pubmed_authors><pubmed_authors>Zayasu Y</pubmed_authors><pubmed_authors>Satoh N</pubmed_authors><pubmed_authors>Chen E</pubmed_authors><pubmed_authors>Takeuchi T</pubmed_authors><pubmed_authors>Shikina S</pubmed_authors><pubmed_authors>Chiu YL</pubmed_authors><pubmed_authors>Lin TC</pubmed_authors><pubmed_authors>Kanda M</pubmed_authors><pubmed_authors>Uchida T</pubmed_authors><pubmed_authors>Cheng YC</pubmed_authors><pubmed_authors>Shinzato C</pubmed_authors><pubmed_authors>Yoshioka Y</pubmed_authors></additional><is_claimable>false</is_claimable><name>Genome and tissue-specific transcriptomes of the large-polyp coral, Fimbriaphyllia (Euphyllia) ancora: a recipe for a coral polyp.</name><description>Coral polyps are composed of four tissues; however, their characteristics are largely unexplored. Here we report biological characteristics of tentacles (Te), mesenterial filaments (Me), body wall (Bo), and mouth with pharynx (MP), using comparative genomic, morpho-histological, and transcriptomic analyses of the large-polyp coral, Fimbriaphyllia ancora. A draft F. ancora genome assembly of 434 Mbp was created. Morpho-histological and transcriptomic characterization of the four tissues showed that they have distinct differences in structure, primary cellular composition, and transcriptional profiles. Tissue-specific, highly expressed genes (HEGs) of Te are related to biological defense, predation, and coral-algal symbiosis. Me expresses multiple digestive enzymes, whereas Bo expresses inna</description><dates><release>2024-01-01T00:00:00Z</release><publication>2024 Jul</publication><modification>2026-06-01T10:01:29.022Z</modification><creation>2025-04-19T13:13:10.008Z</creation></dates><accession>S-EPMC11269664</accession><cross_references><pubmed>39048698</pubmed><doi>10.1038/s42003-024-06544-4</doi></cross_references></HashMap>