{"database":"biostudies-literature","file_versions":[],"scores":null,"additional":{"submitter":["Zhao Q"],"funding":["2022 Medical and Health Research Projects of Heilongjiang Provinc"],"pagination":["839"],"full_dataset_link":["https://www.ebi.ac.uk/biostudies/studies/S-EPMC11270799"],"repository":["biostudies-literature"],"omics_type":["Unknown"],"volume":["24(1)"],"pubmed_abstract":["<h4>Objectives</h4>To investigate the potential mechanisms of shikonin in preventing and treating periodontitis using network pharmacology and molecular docking methods.<h4>Materials and methods</h4>The targets of shikonin were obtained in TCMSP and SEA databases, and targets of periodontitis were gathered from the OMIM, GeneCards and Drugbank Databases. The intersecting targets were entered into the DAVID database to obtain the relevant biological functions and pathways by GO and KEGG enrichment analysis. The obtained targets were analysed the protein-protein interaction (PPI) in STRING platform. In Cytoscape 3.8.0, the network analysis function with the MCODE plug-in were used to obtain the key targets, of shikonin and periodontitis. Molecular docking and molecular dynamics simulation (M"],"journal":["BMC oral health"],"pubmed_title":["Based on network pharmacology and molecular docking to explore the potential mechanism of shikonin in periodontitis."],"pmcid":["PMC11270799"],"funding_grant_id":["20220808050672"],"pubmed_authors":["Hou L","Liu X","Guo L","Zhao Q","Wang K"],"additional_accession":[]},"is_claimable":false,"name":"Based on network pharmacology and molecular docking to explore the potential mechanism of shikonin in periodontitis.","description":"<h4>Objectives</h4>To investigate the potential mechanisms of shikonin in preventing and treating periodontitis using network pharmacology and molecular docking methods.<h4>Materials and methods</h4>The targets of shikonin were obtained in TCMSP and SEA databases, and targets of periodontitis were gathered from the OMIM, GeneCards and Drugbank Databases. The intersecting targets were entered into the DAVID database to obtain the relevant biological functions and pathways by GO and KEGG enrichment analysis. The obtained targets were analysed the protein-protein interaction (PPI) in STRING platform. In Cytoscape 3.8.0, the network analysis function with the MCODE plug-in were used to obtain the key targets, of shikonin and periodontitis. Molecular docking and molecular dynamics simulation (M","dates":{"release":"2024-01-01T00:00:00Z","publication":"2024 Jul","modification":"2026-06-01T06:55:39.111Z","creation":"2025-04-19T13:11:53.198Z"},"accession":"S-EPMC11270799","cross_references":{"pubmed":["39048977"],"doi":["10.1186/s12903-024-04618-7"]}}