<HashMap><database>biostudies-literature</database><scores/><additional><omics_type>Unknown</omics_type><submitter>Weinstock JS</submitter><funding>NHLBI NIH HHS</funding><funding>NIGMS NIH HHS</funding><pubmed_abstract>Clonal hematopoiesis (CH) is defined by the expansion of a lineage of genetically identical cells in blood. Genetic lesions that confer a fitness advantage, such as point mutations or mosaic chromosomal alterations (mCAs) in genes associated with hematologic malignancy, are frequent mediators of CH. However, recent analyses of both single cell-derived colonies of hematopoietic cells and population sequencing cohorts have revealed CH frequently occurs in the absence of known driver genetic lesions. To characterize CH without known driver genetic lesions, we used 51,399 deeply sequenced whole genomes from the NHLBI TOPMed sequencing initiative to perform simultaneous germline and somatic mutation analyses among individuals without leukemogenic point mutations (LPM), which we term CH-LPMneg. </pubmed_abstract><journal>medRxiv : the preprint server for health sciences</journal><pagination>2024.08.22.24312319</pagination><full_dataset_link>https://www.ebi.ac.uk/biostudies/studies/S-EPMC11370504</full_dataset_link><repository>biostudies-literature</repository><pubmed_title>The Genetic Determinants and Genomic Consequences of Non-Leukemogenic Somatic Point Mutations.</pubmed_title><pmcid>PMC11370504</pmcid><funding_grant_id>U01 HL120393</funding_grant_id><funding_grant_id>HHSN268201800001C</funding_grant_id><funding_grant_id>K08 HL166690</funding_grant_id><funding_grant_id>R01 HL120393</funding_grant_id><funding_grant_id>R01 HL117626</funding_grant_id><funding_grant_id>R35 GM139580</funding_grant_id><funding_grant_id>R01 HL105756</funding_grant_id><pubmed_authors>Psaty BM</pubmed_authors><pubmed_authors>Mathias R</pubmed_authors><pubmed_authors>Karantanos T</pubmed_authors><pubmed_authors>Rotter JI</pubmed_authors><pubmed_authors>Laurie C</pubmed_authors><pubmed_authors>Chami N</pubmed_authors><pubmed_authors>Guo X</pubmed_authors><pubmed_authors>O'Brien E</pubmed_authors><pubmed_authors>Boerwinkle E</pubmed_authors><pubmed_authors>Abecasis GR</pubmed_authors><pubmed_authors>Rich SS</pubmed_authors><pubmed_authors>Sankaran V</pubmed_authors><pubmed_authors>Weinstock JS</pubmed_authors><pubmed_authors>Lowenstein CJ</pubmed_authors><pubmed_authors>Nassir R</pubmed_authors><pubmed_authors>Jakubek YA</pubmed_authors><pubmed_authors>Tracy RP</pubmed_authors><pubmed_authors>Kang HM</pubmed_authors><pubmed_authors>Broome JG</pubmed_authors><pubmed_authors>Vasan RS</pubmed_authors><pubmed_authors>Loos RJ</pubmed_authors><pubmed_authors>Raffield LM</pubmed_authors><pubmed_authors>Reiner A</pubmed_authors><pubmed_authors>Battle A</pubmed_authors><pubmed_authors>Kenny EE</pubmed_authors><pubmed_authors>Gu CC</pubmed_authors><pubmed_authors>Cho MH</pubmed_authors><pubmed_authors>Brody JA</pubmed_authors><pubmed_authors>Ioannou M</pubmed_authors><pubmed_authors>Peyser PA</pubmed_authors><pubmed_authors>Haring B</pubmed_authors><pubmed_authors>Kardia SL</pubmed_authors><pubmed_authors>Liggett LA</pubmed_authors><pubmed_authors>Chaudhry SA</pubmed_authors><pubmed_authors>Russell TP</pubmed_authors><pubmed_authors>Bidulescu A</pubmed_authors><pubmed_authors>Scheet P</pubmed_authors><pubmed_authors>Hsiung CA</pubmed_authors><pubmed_authors>de Andrade M</pubmed_authors><pubmed_authors>Smith AV</pubmed_authors><pubmed_authors>Post WS</pubmed_authors><pubmed_authors>Smith JA</pubmed_authors><pubmed_authors>Natarajan P</pubmed_authors><pubmed_authors>Taylor KD</pubmed_authors><pubmed_authors>Reventun P</pubmed_authors><pubmed_authors>Blackwell TW</pubmed_authors><pubmed_authors>Arvanitis M</pubmed_authors><pubmed_authors>Bick A</pubmed_authors><pubmed_authors>Khan A</pubmed_authors><pubmed_authors>Yun JH</pubmed_authors><pubmed_authors>Jaiswal S</pubmed_authors><pubmed_authors>Kooperberg C</pubmed_authors><pubmed_authors>Viskadourou M</pubmed_authors><pubmed_authors>Chen YI</pubmed_authors><pubmed_authors>Auer P</pubmed_authors></additional><is_claimable>false</is_claimable><name>The Genetic Determinants and Genomic Consequences of Non-Leukemogenic Somatic Point Mutations.</name><description>Clonal hematopoiesis (CH) is defined by the expansion of a lineage of genetically identical cells in blood. Genetic lesions that confer a fitness advantage, such as point mutations or mosaic chromosomal alterations (mCAs) in genes associated with hematologic malignancy, are frequent mediators of CH. However, recent analyses of both single cell-derived colonies of hematopoietic cells and population sequencing cohorts have revealed CH frequently occurs in the absence of known driver genetic lesions. To characterize CH without known driver genetic lesions, we used 51,399 deeply sequenced whole genomes from the NHLBI TOPMed sequencing initiative to perform simultaneous germline and somatic mutation analyses among individuals without leukemogenic point mutations (LPM), which we term CH-LPMneg. </description><dates><release>2024-01-01T00:00:00Z</release><publication>2024 Aug</publication><modification>2026-07-14T10:19:39.485Z</modification><creation>2025-04-04T00:29:25.338Z</creation></dates><accession>S-EPMC11370504</accession><cross_references><pubmed>39228737</pubmed><doi>10.1101/2024.08.22.24312319</doi></cross_references></HashMap>